Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0311 ATGGTCATGCAGGATACGTGCAATGTAATGCAGGGGTTGAAGCCAGTGGTGCTAATGGTGGGGGTGCAGGTAGCATATGCTTCGATGAATGTGCTCTACAAGCTTGCCATAAACGACGGAATGAGCTTGTGGGTTGCTATTGCCTTCCGCTTTGTATTCGCAACTGCTTTCCTTGCTCCACTTGCCCTCATTCTTGAAAGGAAGAAGACACCAAAAATGACATGGACGGTACTGTCTCAGTCATTTCTGTGCGGCTTATTTGGAGGAGCATTATCTCAAAACTTCTACTTGGCGGCCTTGGCTCTAACTTCCGCAACGTTTACAGAGGCTATGTTCAACCTCACACCAGCCATTACCTTTGTGATGGCCGTTTGCATAGGGATGGAAGGATTAAATTTGAGAACAATAGGAGGAAAGGCCAAGATAATTGGTACGCTAACTGGAATAGGCGGGGCAATGGTAATGACTTTCGTAAAAGGTGTGCAAATAGAGATGGGGTCCTCTCAGATAAACCTTTTGCGTCACAAAAATGGTGCGAACCCTCACAATAGCTCCGGTAGTAGGACCGTCTTGGGTGCTCTGTGTGCCCTTGGCTGCAGCATCTCTTATTCACTTTGGCTCATCATTCAGACAAAGATGAGTAAGAGATACCCCAGTCGTTACTCAAGCACTGCGTTGATGTGTCTATGGGGATCGCTGATATCCATTGTGTTTGCTCTTTGCATCAAGGGGGATCGGAGTCAATGGAGGTTGGGTTGGAACATTAGGCTTCTAACTGTTGCTTATTCGGGTATAGTTGTTTCTGGATTGATGATGCCTGTGATTTCGTGGTGTGTACGTATGAGAGGCCCATTGTTTGCCTCTGTTTTCAGCCCCTTAACGCTTGTGATGGTCGCCTTGACTGGTTCCACGGTGATGAACGAGAAGCTACACCTAGGAAGCATAGTTGGAGCAGGGTTCATTGTGGGTGGCTTATACATTTATCTATGGGGTAAAAGCAAAGAGGCGAAGAAGATGAATCAATTAGTACCATCAGTTCAATGCGCCCCCGAATCCGACACAGTGGAAGTAATTGTCAGGTCTGTAATAGAAGGTAAAAACAATCACGAGAACAACGATGTTCACCATAATGCCGCAAATGTGGTTAGAGATGATGAAGATTTGTCGGAAAATACTAAATAG 1182 0.4585 MVMQDTCNVMQGLKPVVLMVGVQVAYASMNVLYKLAINDGMSLWVAIAFRFVFATAFLAPLALILERKKTPKMTWTVLSQSFLCGLFGGALSQNFYLAALALTSATFTEAMFNLTPAITFVMAVCIGMEGLNLRTIGGKAKIIGTLTGIGGAMVMTFVKGVQIEMGSSQINLLRHKNGANPHNSSGSRTVLGALCALGCSISYSLWLIIQTKMSKRYPSRYSSTALMCLWGSLISIVFALCIKGDRSQWRLGWNIRLLTVAYSGIVVSGLMMPVISWCVRMRGPLFASVFSPLTLVMVALTGSTVMNEKLHLGSIVGAGFIVGGLYIYLWGKSKEAKKMNQLVPSVQCAPESDTVEVIVRSVIEGKNNHENNDVHHNAANVVRDDEDLSENTK* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0311 393 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Dod04g0311 393 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020|GO:0016021
Dod04g0311 393 PANTHER WAT1-RELATED PROTEIN 14 364 - -
Dod04g0311 393 PANTHER WAT1-RELATED PROTEIN 14 364 IPR030184 GO:0016021|GO:0022857
Dod04g0311 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 334 - -
Dod04g0311 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0311 Dod-Chr4 3948076 3952590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0311 13 384 Nodulin-like Gene Family AT1G25270 42.742 2.11e-97 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0311 - - gmx:100787839 518.464