LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g0306	ATGAAAGGGAAGGAGGAGCATGTGGCGTGGTCTCATATTTCCTTTATTTTCCTCAAGAAGTTAGAACGACTTTTCCATGTTCTGGCTTATATCACATGGTTGGGCAATGGTTGTTTTGAGATCATTCAGAGTTGTCCACATACATCACTTGTTCCTGTGATTGAGGAGACTTATGTTGTCTACACGGGCAATAACATGAAAGATGAAGCTTCTGCATTGTCCCTTTACACAAGTATGCTACAAGAAGTTGCAGACAGCAATGTTGAGCCCAAGTCGGTACTGCACCACTACAAACGTAGTTTCGGTGGCTTTGTTGTGAAGCTAACAGATGAAGAAGCCGACAGAATGGCTGGTAAAGCTCAACACAGAACAAAAAAAAACTGCCCTTTCTCATCATACGACTTACAATTTGCTAACAATAAGATTCTTAATGCAGGACTTGATGGAGTGATCTCTGTCTTTCCTAATGAAAAGCATCAACTCCACACAACAAGGTCTTGGGATTTTATTGGCTTTCCGTTACAAGTGGAAAGAGCAGCAAACGAAAGTGATGTTATCATTGGAGTAATTGACACTGGAATTTGGCCGGAATCTGAGAGCTTCAATGATATAGGATATGGTCCACCACCGAGTAAATGGAAAGGCACATGCCAAACAATTAATTTCACTTGCAATAATAAAATCATTGGGGCTAAGTATTATAGAGCCGATGCATCTACAGCAGCTGGGAACCCGGTCAGCAATGCAAGCATGTTAGGCCTTGCACAGGGAACAGCAAGAGGAGGCGCCACATCGGCACGCATTGCCGTATACAAAGTGTGTTGGGGTGGTGAATGTTATGATGCAGACGTACTTGCTGCATTTGATGATGCAATTGCAGATGGGGTTGACATAATATCAGTTTCGCTTGGAGGAAGTGATCAATACTATTTTAAAAGTGTCATATCCATTGGTGCATTTCATGCAATGAGAAATGGAGTACTGACAGCAGCTTCAGCGGGGAACTCAGGTCCAAGACTTTCATCCGTATTAAATTTTGCACCTTGGTTAATTTCTGTGGGAGCTAGCACCATAGATAGGAATTTTGTTACCAAGGTTGCATTGGGTAACAACAGAACGTACGAGGGAACCTCAATAAATACATTTGACTTGAAGGGAAAATTTTATCCTATAATCTATGGTAGAGATGCACCAGCTGAAGGCGTAGCTGGATCTATGTCCAGGTTTTGTGATAACGGTACATTGAATCAAAATTTAACTGAAGGTAAAATTGTTCTTTGTGATTGGGGAAGCGGAACCATAGGCCCCTTTTATGCTAAAGCTATTGGGGTCCTGACACAAGGTCAATTTTACAGAGACGTTGCATCCTCTCTACCGTTGCCTGGATCCTACCTTGACTTGCAGGATGGTGCCTTTGTATTTGACTACGTTAACTCTACAAGGACTCCAACTGCAACCATATTTAAGAGTACTAATGATTTAAATAATACTTTGGCGCCTAAGGTGGCCTCTTTCTCCTCGAGGGGTCCTAGCCTTGTTACTCCTGAAATTCTCAAGCCTGATTTAGTGGCACCCGGAGTTTCCATTCTAGCTGGCTGGGCCCCAGATTCCCCTCCTACTTTTCTTGAGGGTGACAAAAGAAAATTACAGTTCAATATCGTGTCTGGAACATCAATGTCTTGCCCACATGTTGCTGGGGCAGCAGCATATGTGAAATCATTTCATCCAACGTGGTCTCCTGCTGCAATTCGTTCAGCTCTAATGACGACAGTTTGA	1776	0.4279	MKGKEEHVAWSHISFIFLKKLERLFHVLAYITWLGNGCFEIIQSCPHTSLVPVIEETYVVYTGNNMKDEASALSLYTSMLQEVADSNVEPKSVLHHYKRSFGGFVVKLTDEEADRMAGKAQHRTKKNCPFSSYDLQFANNKILNAGLDGVISVFPNEKHQLHTTRSWDFIGFPLQVERAANESDVIIGVIDTGIWPESESFNDIGYGPPPSKWKGTCQTINFTCNNKIIGAKYYRADASTAAGNPVSNASMLGLAQGTARGGATSARIAVYKVCWGGECYDADVLAAFDDAIADGVDIISVSLGGSDQYYFKSVISIGAFHAMRNGVLTAASAGNSGPRLSSVLNFAPWLISVGASTIDRNFVTKVALGNNRTYEGTSINTFDLKGKFYPIIYGRDAPAEGVAGSMSRFCDNGTLNQNLTEGKIVLCDWGSGTIGPFYAKAIGVLTQGQFYRDVASSLPLPGSYLDLQDGAFVFDYVNSTRTPTATIFKSTNDLNNTLAPKVASFSSRGPSLVTPEILKPDLVAPGVSILAGWAPDSPPTFLEGDKRKLQFNIVSGTSMSCPHVAGAAAYVKSFHPTWSPAAIRSALMTTV*	592

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod04g0306	591	CDD	Peptidases_S8_3	159	590	IPR034197	-
	Dod04g0306	591	ProSitePatterns	Serine proteases, subtilase family, serine active site.	556	566	IPR023828	-
	Dod04g0306	591	PRINTS	Subtilisin serine protease family (S8) signature	555	571	IPR015500	-
	Dod04g0306	591	PRINTS	Subtilisin serine protease family (S8) signature	182	201	IPR015500	-
	Dod04g0306	591	SUPERFAMILY	Subtilisin-like	161	590	IPR036852	GO:0004252\|GO:0006508
	Dod04g0306	591	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	145	590	IPR045051	-
	Dod04g0306	591	Gene3D	Peptidase S8/S53 domain	184	590	IPR036852	GO:0004252\|GO:0006508
	Dod04g0306	591	ProSiteProfiles	Serine proteases, subtilase domain profile.	166	591	-	-
	Dod04g0306	591	CDD	PA_subtilisin_like	368	487	-	-
	Dod04g0306	591	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	45	117	IPR045051	-
	Dod04g0306	591	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	53	162	IPR037045	-
	Dod04g0306	591	Gene3D	-	359	494	-	-
	Dod04g0306	591	PANTHER	PUTATIVE-RELATED	145	590	-	-
	Dod04g0306	591	PANTHER	PUTATIVE-RELATED	45	117	-	-
	Dod04g0306	591	Pfam	Subtilase family	183	590	IPR000209	GO:0006508\|GO:0008236
	Dod04g0306	591	Pfam	Peptidase inhibitor I9	57	117	IPR010259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod04g0306	Dod-Chr4	3833257	3843770	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod04g0306	74	590	Subtilisin-like Serine Gene Family	AT5G59190	46.840	1.51e-158	468

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g0306	-		-	gmx:100795826	743.421