LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g0304	ATGGATAGTAGATCCTCTGCTCTTTTGCTCTTTGTCCTTAGCTTTGCTTCACTTCTTCTGATATGTCAGTCAAATCCCCAAAATGACCTCAAGGCAACTAAGGAGAAGAGCATTTATACTTATATTGTCTACACGGGCAATAACATGAAAGATGAAGCTTCTTCATTGTCCCTTTATACAAGCATGCTACAAGAAGTGACAAACAGCGATATTGAGCCCAGGTCAGTACTATACCACTACAAACGTAGTTTTGGTGGCTTTGTTGTGAAGCTAACAGAGGAAGAAGCTGATAGAATGGCTGAACTTGATGGAGTGGTGTCTGTCTTTCCTAGTGAAAAGAAACAACTCCATACAACAAGGTCTTGGGATTTTATTGGCTTTCCACTACAAGTGCAAAGATCAGCACCTACAAGTGATGTTGTCATTGGAGTAATAGACTCTGGAGTCTGGCCAGAATCTGAAAGCTTCAATGATAAAGGATTCAGTCCACCACCTAGTAAATGGAAGGGCACATGCCAAACAACTAATTTCACTTGCAATAATAAAATTATTGGGGCTAAGTATTATAGAGTTGATAGTGATGGATCATTATTCGACGGAGATATAAAATCGCCAAGAGACACAGATGGTCATGGGACTCATACAGCATCTACAGCAGCTGGGAACCCAGTTAGCAATGCAAGCATGCTAGGCCTTGGCCAGGGAACTGCGAGAGGTGGCGCTGTATCAGCACGCATTGCTGTTTACAAAGTGTGTTGGATTGATGGATGTTATGATGCAGACATACTCGCTGCATTTGATGATGCAATTGCAGATGGGGTTGACGTAATATCAGTTTCCATTGGAGGGTTCAGTGATCAAAACTATTTCAAAGATGTAATAGCCATTGGAGCATTCCATGCTATGAAACATGCAGTATTGACAGCAACTTCAGGAGGGAACTCAGGTCCAGAACTTTCATCCCTGTCAAATGTGGCACCTTGGTTAATTTCTGTGGCTGCTAGCACCACAGACAGGAAGTTTGTCACCAAGGTTGCATTGGGTAACAACAAAACTTATGAGGGAACCTCAATAAATACATTTGACCTGAAGGAAAAATTGTTTCCTATAGTCTATGCTGGAAATGTACCAAGTAAAGGGGTACGTGGATCCACGTCCAGGTTTTGTTCTGTAGGTACGCTGGATCAAAATTTAACCAAGGGTAAGATTGTTCTATGTGAGGGGAGAAGCAAAGCGAGAGGCCCCTTCAATGCCGAAGCCGCTGGGGCCTTGATACAAGGTCAAACATATAGAGATCTTACTCCCTCCCTACCATTGCCTGGATCTTACCTTAACTTGCAGGATGGTGCCCTTGTATTTGATTACATTAACTCTACAAGGACTCCAACAGGAACTATTTTTAAGAGTGAAGAGTTAAAAGATACTTTGGCCCCTATGGTGGCCTCTTTCTCCTCAAGGGGTCCTAACCATGTCACACCTGAAATTCTCAAGCCGGATTTAGCGGCTCCCGGAGTTGCCATTCTAGCTGGATGGTCTCCATTTTCCCCTCCTTCTGATGTCAAAGGAGACAACAGAAAAATACAGTTCAATATAATCTCAGGAACATCAATGGCTTGCCCACATGTTTCTGGGGCAGCATCATACGTTAAATCATTCCATCCAACATGGTCTCCTGCTGCCATTCTTTCAGCTCTAATGACAACAGCACTCCCTTACCACGCACCACCGTCATCATGCCCCAGCTCCTCTCCGCTGTCTCGCACTGTCACCGACAATATCTTCTTCGATTCGATGGATGTCTTGAAGTTGGCGGAGTGGACCGATGAGAGAGGGTGCCAAGCTACCACGAACTTTCAACACCTAGTTGGATTCTTGAAAGATGAGAACTTCGACCAAGTCCTCGATGGTGGCTCGCCGGAGTTGGGTGGTTGGGATGGTCGTCGGGGATTGGCGCCAGATATGGTTAATGGAAGGTGGCAGGGTGGATTCGAGGACAATGGTACAAAGGTAGAAGCAGTGGCACATCAACAAGGTTGTGGAGGGAACTAG	2049	0.448	MDSRSSALLLFVLSFASLLLICQSNPQNDLKATKEKSIYTYIVYTGNNMKDEASSLSLYTSMLQEVTNSDIEPRSVLYHYKRSFGGFVVKLTEEEADRMAELDGVVSVFPSEKKQLHTTRSWDFIGFPLQVQRSAPTSDVVIGVIDSGVWPESESFNDKGFSPPPSKWKGTCQTTNFTCNNKIIGAKYYRVDSDGSLFDGDIKSPRDTDGHGTHTASTAAGNPVSNASMLGLGQGTARGGAVSARIAVYKVCWIDGCYDADILAAFDDAIADGVDVISVSIGGFSDQNYFKDVIAIGAFHAMKHAVLTATSGGNSGPELSSLSNVAPWLISVAASTTDRKFVTKVALGNNKTYEGTSINTFDLKEKLFPIVYAGNVPSKGVRGSTSRFCSVGTLDQNLTKGKIVLCEGRSKARGPFNAEAAGALIQGQTYRDLTPSLPLPGSYLNLQDGALVFDYINSTRTPTGTIFKSEELKDTLAPMVASFSSRGPNHVTPEILKPDLAAPGVAILAGWSPFSPPSDVKGDNRKIQFNIISGTSMACPHVSGAASYVKSFHPTWSPAAILSALMTTALPYHAPPSSCPSSSPLSRTVTDNIFFDSMDVLKLAEWTDERGCQATTNFQHLVGFLKDENFDQVLDGGSPELGGWDGRRGLAPDMVNGRWQGGFEDNGTKVEAVAHQQGCGGN*	683

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod04g0304	682	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	28	574	IPR045051	-
	Dod04g0304	682	CDD	Peptidases_S8_3	114	569	IPR034197	-
	Dod04g0304	682	Gene3D	Peptidase S8/S53 domain	139	572	IPR036852	GO:0004252\|GO:0006508
	Dod04g0304	682	Pfam	Peptidase inhibitor I9	40	117	IPR010259	-
	Dod04g0304	682	PRINTS	Subtilisin serine protease family (S8) signature	533	549	IPR015500	-
	Dod04g0304	682	PRINTS	Subtilisin serine protease family (S8) signature	207	220	IPR015500	-
	Dod04g0304	682	PRINTS	Subtilisin serine protease family (S8) signature	137	156	IPR015500	-
	Dod04g0304	682	Pfam	Subtilase family	138	570	IPR000209	GO:0006508\|GO:0008236
	Dod04g0304	682	ProSitePatterns	Serine proteases, subtilase family, serine active site.	534	544	IPR023828	-
	Dod04g0304	682	MobiDBLite	consensus disorder prediction	200	222	-	-
	Dod04g0304	682	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	23	117	IPR037045	-
	Dod04g0304	682	CDD	PA_subtilisin_like	347	466	-	-
	Dod04g0304	682	ProSiteProfiles	Serine proteases, subtilase domain profile.	121	601	-	-
	Dod04g0304	682	PANTHER	PUTATIVE-RELATED	28	574	-	-
	Dod04g0304	682	SUPERFAMILY	Subtilisin-like	116	578	IPR036852	GO:0004252\|GO:0006508
	Dod04g0304	682	Gene3D	-	338	473	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod04g0304	Dod-Chr4	3787831	3800320	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod04g0304	57	573	Subtilisin-like Serine Gene Family	AT5G59190	50.864	2.01e-176	518

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g0304	-		-	gmx:547512	818.535