Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0294 ATGGAGGCCACACCAAACCACCACCACCACCACCACCACCACCTCCTCCTACTCCTGCTAGCAGCCCTGCTCCTGTCACGCGCCAGTCACGTGACACACGCCGCAACCCCATGCCCACCGTGCGGCAACACCACGGTCCCATTCCCGTTAAGCACAACCCCAACATGCGGCGACCAATCCTACAAAATCCGCTGCACAAACTCCAGCACCACCCTCGTCTTCGACACCCTCAACAACACCTACCCCATCGAGTCCATAAACCCGCAGGCCCAGCGCCTCGTCATCAGGCCCGCACCCCTCGTGCCTGACACGTGCGTCACCACCGACAAGATCCACCAAGGGATCATGCTGAACAGCACCCTCCCTTTCAACATCACGAGCTCCAACACCATCGTCTACCTCAACTGCACCCTCACCCTCCTCATGTCCCCCCTCAACTGCTCCTCCTCAAGCCTCTGCTACACCTACATCGACAACACCGCCTCGGCCCGGGCCTGCCAGGCAGGCCCACTCTGCTGCACGTTTCGGGCCGGCGGCTCCAGCAACTCGTACCAGATTCGGGTCAGGGACGTGGGCTGCAGCGCGTATTCGAGCTTTGTTAATTTGAACCCGGCTTTGCCTGTGAACCGCTGGCCTGAACCGGGTTTGGAGATCCAGTGGATGTCGCCTAGGGAAACGGTTTGTGAGTCGCAGAAGGATTGTGATTCTGCCACGTCGGCTTGTGGGCCTGATACGAGCTCCGGAAACGGGATCAAGAGGTGCTTCTGTATTAATGGGCTTGTGTGGGACCCCATTCGAGGGGTGTGCACTGAAAAGATTACTTGTCAGGATCCGAATGGTTGTGGCCGCTCAACCGATCGAACAGCATTAATAGCAGGCTTAACATGCGGGATTGGAGCAGCACTCATCCTCGCCACCATCTCCCTTCTGCTCTACAAACGCCACAAACGCATCGTAGAAGCACAAGAGCGCATCGCCAAGGAGCGCGAAGCCATTCTCAACGCCAGCGGCGGAGTCAGAACCGCAAAACTCTTCACCGGCAAAGGCATCAAGAAAGCCACCAATGACTTCTCCAGCGACCGCCTCCTCGGCGCCGGGGGCTACGGCGAGGTCTACAAAGGAACCCTCCAAGACGGCACCGTCGTAGCCGTCAAGATCGCCAAGCTCGGCAACGCCAAAGGCACCGACCAAATCCTCAACGAGGTCCGCATATTGTGCCAAGTCAACCACCGAAACCTCGTTGGCCTATTAGGTTGCTGCGTTGAACTAGAACAACCCATCATGGTGTACGAGTTCATAGAAAACGGAACGCTACTTGATCACTTACAAGGTCAAATTCCAAAGGCACGTGGTGTGCTGACGTGGACACATCGACTCAGGATCGCTCGTGACACTGCTGAAGGTCTTGCGTACCTTCACTTCATGGCCGTTCCTCCTATCTACCATAGAGATGTGAAATCGAGCAACATTCTTTTGGACATGAAGTTGAATGCTAAGGTTTCGGATTTTGGGTTGTCTAGGTTGGCTCAAACGGATATGAGTCATATATCTACTTGTGCTCAGGGGACACTTGGGTACCTTGATCCTGAGTATTATAGGAACTATCAGTTGACTGATAAGAGTGATGTTTATAGTTTTGGGGTGGTGTTGCTTGAGATTTTGACGGCGCAGAAGGCTATTGATTTTAATCGGGCCGCAGATGATGTGAACCTGGCGATTTATGTGCAGAGGATGGTGGAGGAGGAGAGGTTGGTTGATGTGATTGATCCGGTGTTGAAGAATGGAGCTAGTGCCGTTGAGATGGATACGATGAAGGCATTGGCGTTTTTGGCGTTGGGGTGCTTGGAGGAACGGAGGCAGAACCGGCCTTCGATGAAGGAGGTGGCAGAGGAGATTGAGTATATCATTAGTATTGCCACTGCTAAGGATGTGGAGGTGGAGGAGTAG 1947 0.5449 MEATPNHHHHHHHHLLLLLLAALLLSRASHVTHAATPCPPCGNTTVPFPLSTTPTCGDQSYKIRCTNSSTTLVFDTLNNTYPIESINPQAQRLVIRPAPLVPDTCVTTDKIHQGIMLNSTLPFNITSSNTIVYLNCTLTLLMSPLNCSSSSLCYTYIDNTASARACQAGPLCCTFRAGGSSNSYQIRVRDVGCSAYSSFVNLNPALPVNRWPEPGLEIQWMSPRETVCESQKDCDSATSACGPDTSSGNGIKRCFCINGLVWDPIRGVCTEKITCQDPNGCGRSTDRTALIAGLTCGIGAALILATISLLLYKRHKRIVEAQERIAKEREAILNASGGVRTAKLFTGKGIKKATNDFSSDRLLGAGGYGEVYKGTLQDGTVVAVKIAKLGNAKGTDQILNEVRILCQVNHRNLVGLLGCCVELEQPIMVYEFIENGTLLDHLQGQIPKARGVLTWTHRLRIARDTAEGLAYLHFMAVPPIYHRDVKSSNILLDMKLNAKVSDFGLSRLAQTDMSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLEILTAQKAIDFNRAADDVNLAIYVQRMVEEERLVDVIDPVLKNGASAVEMDTMKALAFLALGCLEERRQNRPSMKEVAEEIEYIISIATAKDVEVEE* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0294 648 CDD STKc_IRAK 363 633 - -
Dod04g0294 648 SMART serkin_6 357 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0294 648 Gene3D Phosphorylase Kinase; domain 1 308 432 - -
Dod04g0294 648 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 641 IPR045274 GO:0007166
Dod04g0294 648 PANTHER OS05G0318100 PROTEIN 29 641 - -
Dod04g0294 648 Pfam Protein tyrosine and serine/threonine kinase 360 631 IPR001245 GO:0004672|GO:0006468
Dod04g0294 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Dod04g0294 648 Pfam Wall-associated receptor kinase galacturonan-binding 38 95 IPR025287 GO:0030247
Dod04g0294 648 ProSitePatterns Protein kinases ATP-binding region signature. 363 385 IPR017441 GO:0005524
Dod04g0294 648 SUPERFAMILY Protein kinase-like (PK-like) 341 632 IPR011009 -
Dod04g0294 648 Gene3D Transferase(Phosphotransferase) domain 1 433 646 - -
Dod04g0294 648 ProSiteProfiles Protein kinase domain profile. 357 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0294 Dod-Chr4 3651405 3655118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0294 12 645 Receptor kinase-like Gene Family AT5G02070 52.128 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dod04g0294 PK_Tyr_Ser-Thr 7.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0294 - - gmx:100305415 1059.67