Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0288 ATGGCTGGGATTTGCTGTGGTGTTGTTGGAGAGAGTGAAGCAACGGCTACGATTGAGCCGAGCTCACGGCCCTCCAGGCGCCGGAGTCTGGACATGCTGCCTTTGAGATTAATTGCTGACGCGGCAGCGCCACCGACGCCAGCGGAGGCTTCCCGGAAACGCCAGAAGCTCGATCTCTGCGCCGCGATTCGGAGGGACCGCGCAAGCGCGCTCGAGAACCCTGGCTCCTTTGCCGCCGTTGGCGGTGATGGAGGAAACAAGGAAGAGGGAGAGGGATCGAAGGTGGACGAAAACAACGACACCGTTTCGGGGGGTTTGGGGAATGAGGTGGTTGGAGAATGTCCGAAGTTCGGCGTTACGTCCGTTTGCGGCAGGAGGAGGGACATGGAGGATTCCGTTTCGGTGCGTCCTTCGTTCTGCCGTGAGACTCACAGAGACTTCCACTACTTTGGCGTCTTTGACGGTCACGGTTGCTCTCATGTTGCGACGATGTGCAAGGAGAGGCTGCATGAGATTGTGAAGGAGGAGATCGACGTAGCGAAAGAGGAAGAATTCGAGTGGAAGTCCACGATGGAGCGAGGCTTCTCTCGCATGGACGACGAGGTTCAGAGATGGAGCAAGGGAAACAACACCTCGTCGTGCCGCTGCGAGCTCCAGACCCCGCACTGCGACGCTGTCGGATCCACAGCCGTCGTTGCCGTTGTCACGCCCGACAAGGTCATCGTCTCAAACTGCGGCGACTCCCGCGCCGTCCTCTGCCGCAACGGCGTTGCCATCCCCCTCTCCTCCGATCACAAGCCGGATCGACCCGACGAGCTGCTTCGGGTCCAAGAGGCCGGAGGGCGCGTGATCTATTGGGACGTTCCGCGAGTGCTTGGGATGCTAGCCATGTCAAGAGCCATAGGAGATGATTATCTCAAGCCGTACGTGATTTCGGAGCCGGAGGTAACGGTGACGGAGAGGAGTGACGAGGATGAATGTTTGATACTTGCGAGTGACGGGTTGTGGGACGTGGTGCCGAACGACACCGCGTGCGGGGTGGTGCGGATGTGTTTGAAGGCTCAGAAGCTGCCGTATCGGCCGCTGCCGGGCTCTCCGTCGGGCAGTGACGTGGCGGCGGATGGATCCGACAGGGCGTGCTCGGACGCGTCGATTCTGCTCACGAAGCTGGCGTTGGCGAGGCGCAGTGAGGATAATGTGAGCGTGGTGGTGGTTGACTTGAGGAAGGGATCAACAACGGTCCAATCCAACAACAACAACGTTAATTGA 1269 0.5957 MAGICCGVVGESEATATIEPSSRPSRRRSLDMLPLRLIADAAAPPTPAEASRKRQKLDLCAAIRRDRASALENPGSFAAVGGDGGNKEEGEGSKVDENNDTVSGGLGNEVVGECPKFGVTSVCGRRRDMEDSVSVRPSFCRETHRDFHYFGVFDGHGCSHVATMCKERLHEIVKEEIDVAKEEEFEWKSTMERGFSRMDDEVQRWSKGNNTSSCRCELQTPHCDAVGSTAVVAVVTPDKVIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVQEAGGRVIYWDVPRVLGMLAMSRAIGDDYLKPYVISEPEVTVTERSDEDECLILASDGLWDVVPNDTACGVVRMCLKAQKLPYRPLPGSPSGSDVAADGSDRACSDASILLTKLALARRSEDNVSVVVVDLRKGSTTVQSNNNNVN* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0288 422 CDD PP2Cc 116 407 IPR001932 -
Dod04g0288 422 Gene3D - 111 414 IPR036457 -
Dod04g0288 422 MobiDBLite consensus disorder prediction 73 107 - -
Dod04g0288 422 SMART PP2C_4 104 405 IPR001932 -
Dod04g0288 422 SUPERFAMILY PP2C-like 116 408 IPR036457 -
Dod04g0288 422 Pfam Protein phosphatase 2C 117 399 IPR001932 -
Dod04g0288 422 ProSiteProfiles PPM-type phosphatase domain profile. 116 407 IPR001932 -
Dod04g0288 422 PANTHER ALPHABET, ISOFORM E-RELATED 41 410 - -
Dod04g0288 422 ProSitePatterns PPM-type phosphatase domain signature. 149 157 IPR000222 GO:0043169
Dod04g0288 422 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 41 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0288 Dod-Chr4 3580022 3582274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0288 1 409 PP2C-type Phosphatase Gene Family AT3G11410 58.134 3.17e-147 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0288 K14497 - gmx:100796161 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0288 04 3580022 3582274 Dod08g0771 08 9168238 9171156 PCT