Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0282 ATGGAGGAAAATCAGTACTTGATGTGGATGAAGAGAAGACAAGTGTTGAAGTCACATATTCAAGCACCCTTTGAGGCCTTCAACAGCAACAGCTCATGGGAGGAAAGGGCTTTTGCAGAAGATGCTGCTAGGATACTTGGCGGGTGCATATGGCCTCCAAGGTCTTACTCATGCAATTTCTGCAAGAGGGAGTTCAGGTCTGCTCAAGCACTAGGTGGCCACATGAATGTTCATAGGAGGGACAGAGCTAGGCTCAAACAAAGTCTTAGCTCTCATAATAATGATGAATCCCTTAATCATCATCATCACAAAAATGATTGTAAGTCATTAGGTGATGCTCATCAATTCTCTCCAGATCAGAACTCCTCTCAGCTAGATTCTTGTCTTAATCCTGTCCCTTACTCCTCTAGCCTTGCTGATGGTACAGTTACAACAAGCAAAATCTCATCTTCTGTGTCCTCAAATATATCCACACAAGAAGATCTTTTTCAGCACAACATGTCTCATTATTCAATTAGCTGGGGAAAAAAGATGAGGGGGTCTCCTGATTCAGAACCAAAAGGGCTAGTCAATATTGCAAGGGAAAAAAGTCCTAAAGGTTTGAGTTATAGTAATTATGGTTGTGTTGAAACAGGTTTGTCTGTGGGACTGAATTCTGTGTTTAGTCAAAAATTTCCAACTGATTCATGTGAGGATGAAGACATGACTTATAAAAGGCCAAAGACTTCTTCTATGTCTCCCCTTCCTGTTCCTGTCTTCCTCAAGCCATGTTCAAATGATAACCGCTTGCCTTTCCAGTCTGCAGAATCTGTACTTGGACTTAAGCCTGGAATGGAAGACTTGGATCTTGAACTAAGGTTGGGGTAA 867 0.4187 MEENQYLMWMKRRQVLKSHIQAPFEAFNSNSSWEERAFAEDAARILGGCIWPPRSYSCNFCKREFRSAQALGGHMNVHRRDRARLKQSLSSHNNDESLNHHHHKNDCKSLGDAHQFSPDQNSSQLDSCLNPVPYSSSLADGTVTTSKISSSVSSNISTQEDLFQHNMSHYSISWGKKMRGSPDSEPKGLVNIAREKSPKGLSYSNYGCVETGLSVGLNSVFSQKFPTDSCEDEDMTYKRPKTSSMSPLPVPVFLKPCSNDNRLPFQSAESVLGLKPGMEDLDLELRLG* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0282 288 MobiDBLite consensus disorder prediction 88 125 - -
Dod04g0282 288 PANTHER OS07G0101800 PROTEIN 1 128 - -
Dod04g0282 288 PANTHER OS07G0101800 PROTEIN 140 288 - -
Dod04g0282 288 Pfam C2H2-type zinc finger 56 80 - -
Dod04g0282 288 Gene3D Classic Zinc Finger 53 113 - -
Dod04g0282 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Dod04g0282 288 SUPERFAMILY beta-beta-alpha zinc fingers 53 83 IPR036236 -
Dod04g0282 288 MobiDBLite consensus disorder prediction 88 110 - -
Dod04g0282 288 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 128 - -
Dod04g0282 288 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 140 288 - -
Dod04g0282 288 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Dod04g0282 288 SMART c2h2final6 56 78 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0282 Dod-Chr4 3487039 3488074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0282 28 288 C2H2 Transcription Factor Family AT2G37740 34.868 3.15e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod04g0282 zf-C2H2_6 2.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0282 - - aprc:113851273 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0282 04 3487039 3488074 Dod08g0772 08 9184877 9185665 PCT