Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0278 ATGACAGGGTTTCGCTCTTCATGTGGAGCATGCAAGTTCCTAAGGAGAAGGTGCACAAGGGATTGTGTATTTGCTCCTTACTTCTCGTATGATCAAGCAGCAACCCATTTTTCAGCAGTGCATAAGATTTTTGGTGCTAGCAACTTCTCTAGGCTCATGCTACACCTTCCAGTGCAGAATAGATGTGATGCTGCCATCACCATATCTTATGAAGCACTGGCTCGTATGCAGGATCCGGTATATGGTTGTGTTGCTCATATCTATGTATTGCAGCAACAGATTGCAAGCTTGCAAAGGGAGACAGATGATATTCTAGGACATCTGATGGCGAATTCCTTCTTTGGTGCTGACAATTGTGGCAGTGTCCAAGCTCTGATGAACTCAAACAACGGGATAGAATATCTTTTGCATCAAGATGCCACATGGAACCAACATTTTCAAGGTCAAGCGGCTAGTCTACTTTCTCATGAAGGAAGTGAGACAGAATACCAAAGCGTGGACAAAGAGATGGATATAAAGCTAGCTAATGCAAATGAATTTGAAGGCCATATATACGGGGAGCCAGACCCCACCCCATTGGAGAAGTTCCTGTCTGGAATTGACCAAGAGGTCTTCCTGAGTCATCCATGGTTCAAGCATAATGCTGACATAAAGAGCTAG 660 0.4424 MTGFRSSCGACKFLRRRCTRDCVFAPYFSYDQAATHFSAVHKIFGASNFSRLMLHLPVQNRCDAAITISYEALARMQDPVYGCVAHIYVLQQQIASLQRETDDILGHLMANSFFGADNCGSVQALMNSNNGIEYLLHQDATWNQHFQGQAASLLSHEGSETEYQSVDKEMDIKLANANEFEGHIYGEPDPTPLEKFLSGIDQEVFLSHPWFKHNADIKS* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0278 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 216 - -
Dod04g0278 219 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Dod04g0278 219 Pfam Lateral organ boundaries (LOB) domain 7 102 IPR004883 -
Dod04g0278 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0278 Dod-Chr4 3428227 3429129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0278 1 118 AS2 family AT5G06080 63.559 1.05e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod04g0278 LOB 3.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0278 K13945 - gmx:100809636 267.314