Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0276 ATGGCAACAACACTACTTGTGCTTCTCCTGGTTCTTCCCCTTTTGGCCTCAAACCAAGCAAATTCATCTCAAAGCGAAGAGCTTTTCTTCGAAGGCTTCAATGGTGCTGCTGCCGCCACCATGAGCCTAAACGGAGGTGCAGTGATTGAGCAGAGTGGCATACTTCGCTTAACAAACGACACTCAGAGAGTGCTTGGTCATGCGTTTTACCCAACCCCAATCCAATTCAAGAACTCCTCCTCCAACCCCAACTCCAACTCCATCAACAAAGTCTCTTCCTTTTCAACAGCTTTTGCCTTTGCAATAGTACCACAGTACCCAACACTCGGTGGCCACGGCTTCGCCTTCACAATCTCTCCCTCCAAGGACCTTCCCAATGCATACCCCAGCCAGTACTTGGGCCTCCTAAGCCCAAACAATGACGGAAACTTCTCGAACCACTTGTTTGCGGTGGAGTTCGACACCGTGCAGGACTTCGAATTCGGAGACATCAACGACAACCATGTCGGCATCAACATCAACAACATGGTATCCAACAAATCGGTCAAGGCTTCGTTTTTTCCCGATGGGTCGACGAGCAAGGAGGAGCAAGACCTCAACTTGAAGAGCGGCGAGGTGATTCAAGCATGGGTTGATTACGATTCCTCGAGGAACCAATTGGAGGTTAGGCTCTCCCAAACTTCATCAAAACCAAGTTCTCCAATCTTATCTCACCAGGTTGATCTCTCACCGATCCTCAAAGATTCCATGTACGTTGGGTTCTCCTCTTCAACAGGGTTGCTAGCTAGCTCACACTACATCTTGGGATGGAGCTTCAGGCTCAAAGGTGAAGCCACAACCCTCTCACTGAAAAAACTCCCTTCACTCCCTTCCTCACAAAACAAATCCCACATGGCCTTAACTTTGGGACTCTCTCTCTCGGCTTCAATCCTGATCCTCTTTTCAATCGCCATACCATTCTACCTCATCAGAAAAGCGAGAACCGCCGAAGTAATCGAGCCGTGGGAACTCGAAGTCGGTCCCCACAGGTTCCCATACAAGGAGCTAAAGAAGGCCACAAATAACTTCAACCACAAGAACCTCCTCGGATTCGGAGGCTTCGGCAAAGTCTACAAAGGCACCCTGAAAAACAACACCGAAATCGCCGTGAAGCAAGTCTCCCACGACTCAAAACAAGGCCTGCAAGAATTCCTCTCAGAAATCGAAACCATCGGACGGTTACGCCACAGGAACCTCGTACGGCTCCTAGGTTGGTGTCGAAGCCGCAGCGACCTCATGTTAGTCTACGATTACATGCCAAACGGAAGCCTAGACAAGCACCTATTCGACTCGCCGGAAACGATTCTCACGTGGGACCAAAGGTTTAAGATCATAAAAGGGGTAGCATATGGACTATTGTATCTACATGAAGAGTGTGAACAAACGGTGATTCACAGAGACATCAAAGCAGGGAATGTTTTGTTGGACAGTGAGATGAATGGGAGGCTCGGGGATTTCGGTTTGGCGAAGCTTTATGACAGGGGTTCGAACCCGAGGACGACGAGGGTGGTGGGGACGTTAGGGTACTTGGCGCCGGAGCTGACGAAGACGGGGAGGCCGAGCACGTGGTCCGATGTTTACGCGTTTGGGGCGATGTTGTTGGAGGTTGTGTGTGGGAGGAGGCCGGTGGAGGCGAAGGCGATGCCGGAGGAGCTTGTGCTGGTGGAGTGGGTGTGGGAGAGGTGGCGAGTAGGGGCGGTGCTGGAGGTGGTGGATCAGAGGCTTGGTGGGGTTTATGATTTGGTGGAGGTTGTGGTGGTGATTAAGTTGGGGCTGTTGTGTTCTTGTGAGGTGCCGCAAGGGAGGCCTAGTATGAGGCAGGTTGTTAGGTACTTGGAAGGGGAGGTGCCGCTGCCGGAGGTTATTCCTCCGCCGGAGGAGGGATTGAAGAATGGTGGTGGTGGTGGTGGTGAGGTTGAGGATTTTGTGCATTCGCATCGGACGTCGTCATGTTTTGACGTGGAGGGTGGATCCGGTTAG 2019 0.5171 MATTLLVLLLVLPLLASNQANSSQSEELFFEGFNGAAAATMSLNGGAVIEQSGILRLTNDTQRVLGHAFYPTPIQFKNSSSNPNSNSINKVSSFSTAFAFAIVPQYPTLGGHGFAFTISPSKDLPNAYPSQYLGLLSPNNDGNFSNHLFAVEFDTVQDFEFGDINDNHVGININNMVSNKSVKASFFPDGSTSKEEQDLNLKSGEVIQAWVDYDSSRNQLEVRLSQTSSKPSSPILSHQVDLSPILKDSMYVGFSSSTGLLASSHYILGWSFRLKGEATTLSLKKLPSLPSSQNKSHMALTLGLSLSASILILFSIAIPFYLIRKARTAEVIEPWELEVGPHRFPYKELKKATNNFNHKNLLGFGGFGKVYKGTLKNNTEIAVKQVSHDSKQGLQEFLSEIETIGRLRHRNLVRLLGWCRSRSDLMLVYDYMPNGSLDKHLFDSPETILTWDQRFKIIKGVAYGLLYLHEECEQTVIHRDIKAGNVLLDSEMNGRLGDFGLAKLYDRGSNPRTTRVVGTLGYLAPELTKTGRPSTWSDVYAFGAMLLEVVCGRRPVEAKAMPEELVLVEWVWERWRVGAVLEVVDQRLGGVYDLVEVVVVIKLGLLCSCEVPQGRPSMRQVVRYLEGEVPLPEVIPPPEEGLKNGGGGGGEVEDFVHSHRTSSCFDVEGGSG* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0276 672 CDD lectin_legume_LecRK_Arcelin_ConA 30 276 IPR001220 GO:0030246
Dod04g0276 672 SUPERFAMILY Protein kinase-like (PK-like) 338 637 IPR011009 -
Dod04g0276 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Dod04g0276 672 PANTHER - 5 671 - -
Dod04g0276 672 Pfam Protein kinase domain 357 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0276 672 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Dod04g0276 672 Gene3D Transferase(Phosphotransferase) domain 1 432 635 - -
Dod04g0276 672 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 5 671 - -
Dod04g0276 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 292 IPR013320 -
Dod04g0276 672 Gene3D - 28 288 - -
Dod04g0276 672 SMART serkin_6 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0276 672 CDD STKc_IRAK 362 627 - -
Dod04g0276 672 Gene3D Phosphorylase Kinase; domain 1 341 431 - -
Dod04g0276 672 Pfam Legume lectin domain 28 286 IPR001220 GO:0030246
Dod04g0276 672 ProSiteProfiles Protein kinase domain profile. 356 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0276 Dod-Chr4 3395795 3398432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0276 22 669 Receptor kinase-like Gene Family AT3G55550 59.104 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod04g0276 Pkinase 7.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0276 - - adu:107480854 903.279