Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0271 ATGAGGATGTTGCCTGTTTGCTCTGCCACCCCAAGTTATATTTCATCTTCCCAGATTCCCTTGTTTGGGGGATTGCACCCCTTGTACCCGATTCGAAAAGATCTTGAGAACAGATGTGTGGCAGAAGAAGGTGCGCATCTAGGTTTCCAATATGGAACTCACACTCACCCATTGAGAAATTCATTCACAACACAAGCTACAAAGACTGTCTCGGGTAGTTTGATCTCTCCAAGTGAACCAGGATACCTTACAAATACATGGGGTTATTCGCCAGTGACAACAGATGTGCATGGTTCACTGAGTAATGGAGAACTTAGACACATAGAGAGTTATAATTTATCTGCTGTGTCAGAGGGAATGGTGGACTTTGCAGAACAGTCAGCTGAAGGATCTAGCACATTAGTAGTGCCACCAGCACAACTGGAAACACTATCAAGTACTGATGTAATACCAGAGAATTTTACCGCAACTACACCTGGATCGATTAACGTGGACAATCAATCAGTAGCAAGCACAAAAGCAAGTGTTGGTGACCTTTTCTCTGGAATCAATCAGTCATTCAACACTTCAATTAATGAGGGAGAAAATGCCTTGCGGAGCTCACTGGATACAGTCACTTCTTTTGTAGATTCTATTGTTAAAAGTGCTACTAAATCCATAGATAATGCTTTTAGTAAGGCATTTTCTGCTGTTGATCAAACGGGGGAATTGGCAAATAAAAAAATTACTGGCTTTTCAAGTGAGTTAAGTGGAGTAACTGGTAAGGTACAGGCTGTGGCTGTTGATGTGTTGCGCAGCACAATCATAGCAGTAGAGAGTTCTTTAGCAAGTGGAGCATCCTATGCTGTCTACCTGTATGGGTCTGGTAAGGAGAACCTTCCTGCAGAGATTAGGGATACAGTCAATGTCTATGAAGAAAAGGCAATGGAGATCTTGAGGCCTATTGGATCTGCCTCTCAACAGATATACATGGCTGTCTATTCATTGGAGAAGAATCTTGGCTTGGAACCAGATGACCCAATTGTTCCCTTTGTTGTTCTTGTGGGCTCTTCAGCAACATTATGGGCGGTTTATTGGTTGTTGACATATGGAGGTTACTCAGGAGATTTATCCCCTGAATCAACTTTGGATCTTCTGACTGAGGACAAAGATGCAGCATTGATAGATGTCCGCAATGAGGATTTGCTAGAAAAAGATGGTATTCCTGATCTTCGATGGTCTGCTCGGTTTCGCTATGCAAATGTGCCTCCACTTGAGGTCAGTGGCTCCTTACGCAAACTGTTCAAAGGTGGTAGAGACCTTGATGACTCCTTGATTGCTGCTATTATTCGAAATTCGAAGATTGTCAAGGACAGTTCCAAGGTTATAGTTTTGGATGCTGATGGTACTCGTTCTAAAGGCATTGCAAGATCCTTGAGGAAAATTGGGGTCAAGAATGCATACATGGTTCAAGGTGGTTTTCAGGCTTGGATGAAACAAGGCCTCCGCATCAAGGAACTCAAACCCGAGACAGCACTTACCATACTTAATGAGGAAGCAGAGGCAATTCTGGAGGATGTTAGACCTTCTTCCTTGCAACTTTTAGGTTATGGTACGGCTCTTCTTGCGGGGTTGTATGCATTATTAGAGTGGGAGAAGACATTGCAGTTAATTGGTGCAGTTGGCCTCGGTTTGACCATCTATCTGCGGGTTTCTTCATACGAGAAGTCGGAAGATCTGAAGCAAGATGTGAGGTTATTGCTTGCTCCTGTTAGACTTGGGGCTCAAGCATTTTCATGGGCTGCTGGAAAATTAGAATCGAATCGCATAGGGCTTCGGACATCACCTTCATCATTGGATGTTCAGAACCGGGTATTGCAGGCTGCTGCCAAGCACGAATCTCAACCATCTGACAGTGAAGGCAACCAAGATCCCGTTCCCGAGCAGACAGTTCCTCTCAATCAGAATATTCTACTAACAATTTGTGGTGTTGCAACTTATAGTATTGTGAGTGTGAACTCATCCTTCAATAAACTTGTATGTTGTTTTGATCTTTTACGACGCGTTAGTAACACGATCCCCTTGGCAACGCCTTGCATGCAAAAGCTATTAAGGGTCAATAAACACAAGTTATTTATGGGAAATGGGGGTCGTAAGACTCATTTGTTAGCTCATTTAGGAGTATACAAGAATTTCTGA 2178 0.4316 MRMLPVCSATPSYISSSQIPLFGGLHPLYPIRKDLENRCVAEEGAHLGFQYGTHTHPLRNSFTTQATKTVSGSLISPSEPGYLTNTWGYSPVTTDVHGSLSNGELRHIESYNLSAVSEGMVDFAEQSAEGSSTLVVPPAQLETLSSTDVIPENFTATTPGSINVDNQSVASTKASVGDLFSGINQSFNTSINEGENALRSSLDTVTSFVDSIVKSATKSIDNAFSKAFSAVDQTGELANKKITGFSSELSGVTGKVQAVAVDVLRSTIIAVESSLASGASYAVYLYGSGKENLPAEIRDTVNVYEEKAMEILRPIGSASQQIYMAVYSLEKNLGLEPDDPIVPFVVLVGSSATLWAVYWLLTYGGYSGDLSPESTLDLLTEDKDAALIDVRNEDLLEKDGIPDLRWSARFRYANVPPLEVSGSLRKLFKGGRDLDDSLIAAIIRNSKIVKDSSKVIVLDADGTRSKGIARSLRKIGVKNAYMVQGGFQAWMKQGLRIKELKPETALTILNEEAEAILEDVRPSSLQLLGYGTALLAGLYALLEWEKTLQLIGAVGLGLTIYLRVSSYEKSEDLKQDVRLLLAPVRLGAQAFSWAAGKLESNRIGLRTSPSSLDVQNRVLQAAAKHESQPSDSEGNQDPVPEQTVPLNQNILLTICGVATYSIVSVNSSFNKLVCCFDLLRRVSNTIPLATPCMQKLLRVNKHKLFMGNGGRKTHLLAHLGVYKNF* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0271 725 Pfam Rhodanese-like domain 376 492 IPR001763 -
Dod04g0271 725 Gene3D - 366 504 IPR036873 -
Dod04g0271 725 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 354 498 IPR036873 -
Dod04g0271 725 SMART rhod_4 371 496 IPR001763 -
Dod04g0271 725 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 650 IPR044690 GO:0009704|GO:0071277|GO:0090333
Dod04g0271 725 CDD RHOD 375 490 - -
Dod04g0271 725 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 650 - -
Dod04g0271 725 ProSiteProfiles Rhodanese domain profile. 381 499 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0271 171 460 Sulfurtransferasese or Rhodanese AT5G23060 22.591 5.40e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0271 - - adu:107482796 1002.66