LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g0271	ATGAGGATGTTGCCTGTTTGCTCTGCCACCCCAAGTTATATTTCATCTTCCCAGATTCCCTTGTTTGGGGGATTGCACCCCTTGTACCCGATTCGAAAAGATCTTGAGAACAGATGTGTGGCAGAAGAAGGTGCGCATCTAGGTTTCCAATATGGAACTCACACTCACCCATTGAGAAATTCATTCACAACACAAGCTACAAAGACTGTCTCGGGTAGTTTGATCTCTCCAAGTGAACCAGGATACCTTACAAATACATGGGGTTATTCGCCAGTGACAACAGATGTGCATGGTTCACTGAGTAATGGAGAACTTAGACACATAGAGAGTTATAATTTATCTGCTGTGTCAGAGGGAATGGTGGACTTTGCAGAACAGTCAGCTGAAGGATCTAGCACATTAGTAGTGCCACCAGCACAACTGGAAACACTATCAAGTACTGATGTAATACCAGAGAATTTTACCGCAACTACACCTGGATCGATTAACGTGGACAATCAATCAGTAGCAAGCACAAAAGCAAGTGTTGGTGACCTTTTCTCTGGAATCAATCAGTCATTCAACACTTCAATTAATGAGGGAGAAAATGCCTTGCGGAGCTCACTGGATACAGTCACTTCTTTTGTAGATTCTATTGTTAAAAGTGCTACTAAATCCATAGATAATGCTTTTAGTAAGGCATTTTCTGCTGTTGATCAAACGGGGGAATTGGCAAATAAAAAAATTACTGGCTTTTCAAGTGAGTTAAGTGGAGTAACTGGTAAGGTACAGGCTGTGGCTGTTGATGTGTTGCGCAGCACAATCATAGCAGTAGAGAGTTCTTTAGCAAGTGGAGCATCCTATGCTGTCTACCTGTATGGGTCTGGTAAGGAGAACCTTCCTGCAGAGATTAGGGATACAGTCAATGTCTATGAAGAAAAGGCAATGGAGATCTTGAGGCCTATTGGATCTGCCTCTCAACAGATATACATGGCTGTCTATTCATTGGAGAAGAATCTTGGCTTGGAACCAGATGACCCAATTGTTCCCTTTGTTGTTCTTGTGGGCTCTTCAGCAACATTATGGGCGGTTTATTGGTTGTTGACATATGGAGGTTACTCAGGAGATTTATCCCCTGAATCAACTTTGGATCTTCTGACTGAGGACAAAGATGCAGCATTGATAGATGTCCGCAATGAGGATTTGCTAGAAAAAGATGGTATTCCTGATCTTCGATGGTCTGCTCGGTTTCGCTATGCAAATGTGCCTCCACTTGAGGTCAGTGGCTCCTTACGCAAACTGTTCAAAGGTGGTAGAGACCTTGATGACTCCTTGATTGCTGCTATTATTCGAAATTCGAAGATTGTCAAGGACAGTTCCAAGGTTATAGTTTTGGATGCTGATGGTACTCGTTCTAAAGGCATTGCAAGATCCTTGAGGAAAATTGGGGTCAAGAATGCATACATGGTTCAAGGTGGTTTTCAGGCTTGGATGAAACAAGGCCTCCGCATCAAGGAACTCAAACCCGAGACAGCACTTACCATACTTAATGAGGAAGCAGAGGCAATTCTGGAGGATGTTAGACCTTCTTCCTTGCAACTTTTAGGTTATGGTACGGCTCTTCTTGCGGGGTTGTATGCATTATTAGAGTGGGAGAAGACATTGCAGTTAATTGGTGCAGTTGGCCTCGGTTTGACCATCTATCTGCGGGTTTCTTCATACGAGAAGTCGGAAGATCTGAAGCAAGATGTGAGGTTATTGCTTGCTCCTGTTAGACTTGGGGCTCAAGCATTTTCATGGGCTGCTGGAAAATTAGAATCGAATCGCATAGGGCTTCGGACATCACCTTCATCATTGGATGTTCAGAACCGGGTATTGCAGGCTGCTGCCAAGCACGAATCTCAACCATCTGACAGTGAAGGCAACCAAGATCCCGTTCCCGAGCAGACAGTTCCTCTCAATCAGAATATTCTACTAACAATTTGTGGTGTTGCAACTTATAGTATTGTGAGTGTGAACTCATCCTTCAATAAACTTGTATGTTGTTTTGATCTTTTACGACGCGTTAGTAACACGATCCCCTTGGCAACGCCTTGCATGCAAAAGCTATTAAGGGTCAATAAACACAAGTTATTTATGGGAAATGGGGGTCGTAAGACTCATTTGTTAGCTCATTTAGGAGTATACAAGAATTTCTGA	2178	0.4316	MRMLPVCSATPSYISSSQIPLFGGLHPLYPIRKDLENRCVAEEGAHLGFQYGTHTHPLRNSFTTQATKTVSGSLISPSEPGYLTNTWGYSPVTTDVHGSLSNGELRHIESYNLSAVSEGMVDFAEQSAEGSSTLVVPPAQLETLSSTDVIPENFTATTPGSINVDNQSVASTKASVGDLFSGINQSFNTSINEGENALRSSLDTVTSFVDSIVKSATKSIDNAFSKAFSAVDQTGELANKKITGFSSELSGVTGKVQAVAVDVLRSTIIAVESSLASGASYAVYLYGSGKENLPAEIRDTVNVYEEKAMEILRPIGSASQQIYMAVYSLEKNLGLEPDDPIVPFVVLVGSSATLWAVYWLLTYGGYSGDLSPESTLDLLTEDKDAALIDVRNEDLLEKDGIPDLRWSARFRYANVPPLEVSGSLRKLFKGGRDLDDSLIAAIIRNSKIVKDSSKVIVLDADGTRSKGIARSLRKIGVKNAYMVQGGFQAWMKQGLRIKELKPETALTILNEEAEAILEDVRPSSLQLLGYGTALLAGLYALLEWEKTLQLIGAVGLGLTIYLRVSSYEKSEDLKQDVRLLLAPVRLGAQAFSWAAGKLESNRIGLRTSPSSLDVQNRVLQAAAKHESQPSDSEGNQDPVPEQTVPLNQNILLTICGVATYSIVSVNSSFNKLVCCFDLLRRVSNTIPLATPCMQKLLRVNKHKLFMGNGGRKTHLLAHLGVYKNF*	726

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod04g0271	725	Pfam	Rhodanese-like domain	376	492	IPR001763	-
	Dod04g0271	725	Gene3D	-	366	504	IPR036873	-
	Dod04g0271	725	SUPERFAMILY	Rhodanese/Cell cycle control phosphatase	354	498	IPR036873	-
	Dod04g0271	725	SMART	rhod_4	371	496	IPR001763	-
	Dod04g0271	725	PANTHER	RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN	3	650	IPR044690	GO:0009704\|GO:0071277\|GO:0090333
	Dod04g0271	725	CDD	RHOD	375	490	-	-
	Dod04g0271	725	PANTHER	RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN	3	650	-	-
	Dod04g0271	725	ProSiteProfiles	Rhodanese domain profile.	381	499	IPR001763	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod04g0271	171	460	Sulfurtransferasese or Rhodanese	AT5G23060	22.591	5.40e-08	53.5

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g0271	-		-	adu:107482796	1002.66

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