Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0261 ATGCCTTTCATTTCGAAAATCCAGCGCCAATCTGATTACAACCTCTTCGGTTCCGCCACTCCTCTCGTGATCGACAATGGCGCTTCCTATTTCCGCATTGGGTGGGCAGGAGAGACCGAACCTCGTGTTATTTTCCGCAACATTGTCCAAAGGCCACGCCACAAAACCACTGGAGAAACTGTCACTATTGTTGGTGACCACGATCCAGCATTATTGAAGTATTTTGACTGCACACGCTCTGGGCCACGCTCAGCATTTGACAGCAATGTTGTTTACCAGTTTGAAATAATGGAATATATTCTTGATTTTGGATTTGACCGGATGGGTGCAAATGGATCAGAGATTGATCATCCTGTCCTGATCACAGAATGTGTGTGCAACCCAGTTCAGTCTCGTAGTAAAATGGGAGAACTTCTTTTTGAGACGTATGGAGTTCCATCTATAGCCTTTGGTGTTGATGCAGCATTCAGCTATAAATATAATCAACAGCGAGGAGTTTGTGATAAAGATGGTCTTGCTATGTGTCCTGGATTTACTACAACCCATGTGATTCCGTTTGTAGATGGCGAGCCTATTTATAAAGGAAGCTGCCGTACTAATATTGGTGGATTCCATGTCACTGATTATTTCAAGCAACTTCTTTCACTTAAATATCCTTATCATATGGCTAGATTTACATGGGAAAAGGTTGAAGACCTCAAGATGGAACATTGTTATATTGCACAGGATTATGCTTCTGAAGCCCGGTTGTTTCAGAAAGGAGACAAGGAGGCTGAAGAGAAAACCAGATTGTGGCAGCTCCCTTGGGTCCCACCCCCAACTGAGGAGCCTCCTTCTGCAGAAGAGATTGCAAGAAAGGCAGCAATAAAAGAGAAACAAGGTCAAAGGTTGCGAGAAATGGCTGAGGCAAAGAGGTCATCCCGAATAAATGAATTGGAAAATGAGCTGCATGGTTTAGAATTTCTTTTGCATCAGCTTGAACAGGTTGAAGAGAGTGATATTCCATCTTTCCTAGCAGAGACTGGCTATGTCTCTAGGCAAGAGATAGAATCTGCCCGTAATAAAGTTGCACAATCCTTACGGAAAGCAAAAGGTGAACCAAAGAGTGAACAAGCTGAAACTGAAATTCCAGACCCTGCCACCAATGAGAAGTACTCGCTGGTAAACATCCCTGATGACATGCTGACCCCGGAGCAGCTCATTGAAAAGAAGAAACAATTGTCACTCAAATCCATGTCTGAAGGGCGGCAGCGATTAAAACAGAAGCGCTATGAAGAGGAATTGGAACGAGAAAGGAAACAACAGCTGGAGGAGGAGAAACGATTAGAGAATCCAGAGCTTTACTTGGAACAATTGCATGCTAGATACAAAGATCTTTCAGAGAAAATTGATCAACGAAAACGGCTCAAGACAAATGGAGGCCATACAAATGGAAATAATTTGTCTGGTGCTGTTGGTCGTGGCGAGAGACTGAATGCTGCTCAAAGAGAAAGAATGCGGCTCTTGACAACTGCTGCTTTTGATCGTGGTAAGGGTGAAGATACATTTGGCGCCAAGGACGAAGATTGGCAACTTTACAAATTGATGAGCAAAGATAATGATGACGATGATGAGGGACCAGATGAGGATGACATGGAGCTATCCCGCATCTCTTCGAGACTCCAGGACTTGGATCCAACATTTGTGCCCAAGTCAGAAACAAGCACCTCTCAACCTGCTGAGGTTCCACGTGTTCGTCCTCTCACCAAAGAAGATTTTCAGATTGTTTTTGGGGTTGAAAGGTTCAGATGCCCCGAAATCTTGTTTAATCCAAACTGGATTGGGATTGATCAGGTAGGGTTAGATGAGATGGCCGGGGTCTCAATAAAAAGGTTACCTTACAAGGATGAAAGCCTGGAAGCGAGACTGACTAATTCCATTCTAGTGACTGGTGGAAGCTCTCTTTTCCCTGGTATCGTTGAACGCCTAGAAGCTGGAATTCGGATGATTAGACCATGCGGATCACCTATAAAAATAGTTAGGGCTCTGGATCCGGTGATGGATGCGTGGCGCGGGGCTGCTGCCTATGCGTCAGCCCCACAATTCCACACACAAACTTTCAGCAAGATGGATTACTATGAAAAGGGCGAGGACTGGCTTCGCGGTTATCAACTGAAATATTCATTATGA 2169 0.4449 MPFISKIQRQSDYNLFGSATPLVIDNGASYFRIGWAGETEPRVIFRNIVQRPRHKTTGETVTIVGDHDPALLKYFDCTRSGPRSAFDSNVVYQFEIMEYILDFGFDRMGANGSEIDHPVLITECVCNPVQSRSKMGELLFETYGVPSIAFGVDAAFSYKYNQQRGVCDKDGLAMCPGFTTTHVIPFVDGEPIYKGSCRTNIGGFHVTDYFKQLLSLKYPYHMARFTWEKVEDLKMEHCYIAQDYASEARLFQKGDKEAEEKTRLWQLPWVPPPTEEPPSAEEIARKAAIKEKQGQRLREMAEAKRSSRINELENELHGLEFLLHQLEQVEESDIPSFLAETGYVSRQEIESARNKVAQSLRKAKGEPKSEQAETEIPDPATNEKYSLVNIPDDMLTPEQLIEKKKQLSLKSMSEGRQRLKQKRYEEELERERKQQLEEEKRLENPELYLEQLHARYKDLSEKIDQRKRLKTNGGHTNGNNLSGAVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSKDNDDDDEGPDEDDMELSRISSRLQDLDPTFVPKSETSTSQPAEVPRVRPLTKEDFQIVFGVERFRCPEILFNPNWIGIDQVGLDEMAGVSIKRLPYKDESLEARLTNSILVTGGSSLFPGIVERLEAGIRMIRPCGSPIKIVRALDPVMDAWRGAAAYASAPQFHTQTFSKMDYYEKGEDWLRGYQLKYSL* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0261 722 CDD NBD_sugar-kinase_HSP70_actin 22 202 - -
Dod04g0261 722 SMART actin_3 19 718 IPR004000 -
Dod04g0261 722 Gene3D Actin; Chain A, domain 4 207 261 - -
Dod04g0261 722 Gene3D - 612 681 - -
Dod04g0261 722 MobiDBLite consensus disorder prediction 561 575 - -
Dod04g0261 722 SUPERFAMILY Actin-like ATPase domain 171 714 IPR043129 -
Dod04g0261 722 Coils Coil 419 445 - -
Dod04g0261 722 Gene3D - 682 710 - -
Dod04g0261 722 Coils Coil 449 469 - -
Dod04g0261 722 PANTHER ACTIN-RELATED PROTEIN 5 14 714 IPR027664 -
Dod04g0261 722 Coils Coil 309 329 - -
Dod04g0261 722 MobiDBLite consensus disorder prediction 556 576 - -
Dod04g0261 722 Gene3D - 22 150 - -
Dod04g0261 722 Gene3D Actin; Chain A, domain 4 523 611 - -
Dod04g0261 722 Gene3D Actin; Chain A, domain 2 49 85 - -
Dod04g0261 722 SUPERFAMILY Actin-like ATPase domain 19 159 IPR043129 -
Dod04g0261 722 Gene3D - 152 206 - -
Dod04g0261 722 Pfam Actin 587 713 IPR004000 -
Dod04g0261 722 Pfam Actin 20 268 IPR004000 -
Dod04g0261 722 PANTHER ACTIN 14 714 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0261 Dod-Chr4 3175290 3181380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0261 588 709 Miscellaneous Gene Families AT2G42100 33.607 1.57e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0261 K11672 - gmx:100808396 1276.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0261 04 3175290 3181380 Dod08g0791 08 9455442 9457321 PCT