Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0240 ATGGCTCTCTCTAATTTATCAACACACCCCAATAACCTCAACATCATCCTCGAAACAAATCCGACCCCTTTCATTGTTGATCTCCTCAAAACCTGTAAAAAATCCTCAAAAACAGCTGAAAAATGCTGTGCCTTGATTGAATCCTTGGTGGAATATGAAGAGGGAAGAACTTCCTTGACATCTGAAGAAGGCGGGGTCCTTGCAGTTGTGGAAGTTCTTGAAAATGGCACACTCCAAAGTAGGGAGCATACTGTTGGAGCACTATTGACAATGTGCCAAAGTGACAGATGCAAATACAGGGAACCAATCCTTAGAGAAGGTGTAATCCCAGGACTACTTGAGCTCACTGTTCAAGGAACTCCAAAGTCTCAGTCAAAAGCGCGCGCCCTCCTGCAGTTGTTAAGAGAGTCACCTTACCCAAGATCTGAGATTCAACCTGACACACTTGAGAACATAGTTTGCAACATCATATCACAGATTGATGGGGATGATCAATCTGGTAAAGCAAAGAAGATGCTGGCTGAGATGGTTCAAGTGAGCATGGAGCAGAGTCTAAGGCATTTACAGCAACGGGCTCTTGTGTGCACACCAAGTGATATTCCTATAGGTTGTGCTTCTGAAGTTCCTTCAAAATAA 636 0.4371 MALSNLSTHPNNLNIILETNPTPFIVDLLKTCKKSSKTAEKCCALIESLVEYEEGRTSLTSEEGGVLAVVEVLENGTLQSREHTVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQSKARALLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDIPIGCASEVPSK* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0240 211 Gene3D - 1 145 IPR011989 -
Dod04g0240 211 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 195 - -
Dod04g0240 211 PANTHER U BOX DOMAIN-CONTAINING 1 195 - -
Dod04g0240 211 SUPERFAMILY ARM repeat 2 189 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0240 Dod-Chr4 2970691 2971326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0240 2 135 U-box Gene Family AT2G23140 32.090 5.20e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0240 - - gmx:100809684 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0240 04 2970691 2971326 Dod04g0240 04 2970691 2971326 ECH
Dod04g0240 04 2970691 2971326 Dod08g0813 08 9660933 9664977 PCT