Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0235 ATGTATTACCAACCCTTCTTCTTTTTCTTCTTCTTTAGCAGTAGAAGGAGGAGCAAAGATGATGAATGCAACTGCTGCCACCGCAACAAGAATGGGAATTTGGAGCACAACAAGGCTTGGCTTCTTGCTGAGTCTGGTGGATGTGGACCAGAACTCAGCAACAGTGCTGACCCTCAATCTGTTCACTCATCCTTCAGGTTCAGCTTCTGCTCCCAGGTCGAGTTGGAATCCCTTAACATGAGTTCTTCCTCTGCTGCAACTGTTTTGATGGTGAATTTGGACAATGGGGTGAGTGAGTCACGCGCCAGGGAGATCAAGTGGAGGAGGATTGAGTCCTTGGAGAAGAGCATATCCCCAGTTGCACACACCTTAATCAGGTTCACCTATTCTGAAATCCTCTCTGCCACCCGCAATTTCTCCAAAGGTAGAGTATTGGGGAGAGGGGCATTGAGCTGTGTTTTTAGGGGAAAAGTTGGGCTCTTGAGGACTGCTGTGGCAATCAAAAGGTTGGACAAGGAAGACAAAGAATCTGCCAAGGCCTTTTGCAGAGAATTGATGATTGCAAGTTCCCTTCATAGCCCAAACGTTGTTCCCCTTGTTGGTTTTTGTATTGACCCCGAGGAGGGTTTGTTTTTGGTGTACAAGTATGTCTCTGGAGGCAGCTTGGAGCGGCACTTGCATGGGAGGAAGAAGGGTGTGAAGGGTACTTCATCTCTTCCATGGTCTGTGAGATATTTGGCTCCCGAGTATTTCCAACATGGAAAAGTATCGGATAAAACAGATGTTTATGCTTTTGGTGTGGTTTTATTGGAACTCATAACTGGCCGCAAGCCAATCGAAGCAAAAGGGTCTCCGGGCGAGGAGAACTTGGTCTTATGGGCTAAACCTTTTCTACAGAAAGGGAAAGGAGCCATTGAAGAGTTGCTTGATCCTCAACTCAAGTGCAGCTTGAGATATTCAAATCAAATGGCTCGAATGATTGAAGCAGCAGCTGCTTGCGTCACGAATGAAGAATCTCGGAGGCCTGGCATACACGAGATTATTGCAATACTGAAAGGTGAAGAAGAACCTCTCTTCTCTAAAAGAAAGAAGTCCAGTTTTCTTGGGAATGGATGTGTGATTGATTGCTATTCTCAACTACAACAAACAAATAATGAGATGAAAAGTCACTTGGCTCTGGCAATGCTAGGAGTTTCAGAGTTTGAGGATGAGGATTATCTCTATGGTCGATTAAAACATGATGACTACCAATAA 1254 0.4522 MYYQPFFFFFFFSSRRRSKDDECNCCHRNKNGNLEHNKAWLLAESGGCGPELSNSADPQSVHSSFRFSFCSQVELESLNMSSSSAATVLMVNLDNGVSESRAREIKWRRIESLEKSISPVAHTLIRFTYSEILSATRNFSKGRVLGRGALSCVFRGKVGLLRTAVAIKRLDKEDKESAKAFCRELMIASSLHSPNVVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRKKGVKGTSSLPWSVRYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKGSPGEENLVLWAKPFLQKGKGAIEELLDPQLKCSLRYSNQMARMIEAAAACVTNEESRRPGIHEIIAILKGEEEPLFSKRKKSSFLGNGCVIDCYSQLQQTNNEMKSHLALAMLGVSEFEDEDYLYGRLKHDDYQ* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0235 417 Pfam Protein tyrosine and serine/threonine kinase 141 230 IPR001245 GO:0004672|GO:0006468
Dod04g0235 417 Pfam Protein tyrosine and serine/threonine kinase 237 348 IPR001245 GO:0004672|GO:0006468
Dod04g0235 417 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 11 245 - -
Dod04g0235 417 Gene3D Phosphorylase Kinase; domain 1 124 216 - -
Dod04g0235 417 PANTHER OS01G0750732 PROTEIN 245 408 - -
Dod04g0235 417 PANTHER OS01G0750732 PROTEIN 11 245 - -
Dod04g0235 417 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 245 408 - -
Dod04g0235 417 ProSiteProfiles Protein kinase domain profile. 139 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0235 417 Gene3D Transferase(Phosphotransferase) domain 1 217 367 - -
Dod04g0235 417 SUPERFAMILY Protein kinase-like (PK-like) 119 352 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0235 Dod-Chr4 2903375 2905871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0235 127 358 Receptor kinase-like Gene Family AT1G52310 28.094 9.69e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod04g0235 PK_Tyr_Ser-Thr 5.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0235 - - adu:107481060 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0235 04 2903375 2905871 Dod04g0235 04 2903375 2905871 ECH
Dod04g0235 04 2903375 2905871 Dod08g0814 08 9715449 9719087 PCT