Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0205 ATGAGAAAACCTTGCTTTGATTCCTGTCCAATTCATCCTGTCAATAAGAATGAGTTAAATAAATACTGTATAACCTGTGATCAGCCAATTTGCCACTATTGTGCATCAAATCCTACTCATCGGCTGCACAAGACCCTAAAACTCTACAGACATTCTTTCAAAAATGTTGTCTCCCTTGATGCTATGGTAGAGCATATTGACTGCTCAGAAATTCAGCCCTACAAAAGCAATAAGATCTGGATTGTTGCTCTGGAGCCTCTTCCACACTCTGGCAAGGTAAAATGGTGCGAGGCAACACTATGCGACATCTGTAAGATAAAGTTGACTGACCCGACTTTATACCGCTACTGCTCTATTTCTTGCAAGGTCCAAGCTGTTTTAAGGAAGACCGATGATTCAGTTCCTCCCTTCATTTTGCTCGAGAAGGACAGAGAGGATCAAACTGCTGGAGCCAGCAAGCGGCTAAAGAAAAGGAAGCGAACACCCACCAGATCTCCCTTCTTCTGA 507 0.432 MRKPCFDSCPIHPVNKNELNKYCITCDQPICHYCASNPTHRLHKTLKLYRHSFKNVVSLDAMVEHIDCSEIQPYKSNKIWIVALEPLPHSGKVKWCEATLCDICKIKLTDPTLYRYCSISCKVQAVLRKTDDSVPPFILLEKDREDQTAGASKRLKKRKRTPTRSPFF* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0205 168 SUPERFAMILY B-box zinc-binding domain 8 52 - -
Dod04g0205 168 ProSiteProfiles Zinc finger B-box type profile. 9 48 IPR000315 GO:0008270
Dod04g0205 168 MobiDBLite consensus disorder prediction 145 168 - -
Dod04g0205 168 CDD Bbox2 9 48 - -
Dod04g0205 168 Gene3D Classic Zinc Finger 6 49 - -
Dod04g0205 168 Pfam PLATZ transcription factor 50 123 IPR006734 -
Dod04g0205 168 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 168 - -
Dod04g0205 168 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 1 168 - -
Dod04g0205 168 MobiDBLite consensus disorder prediction 153 168 - -
Dod04g0205 168 Pfam B-box zinc finger 8 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0205 Dod-Chr4 2516725 2521149 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Dod04g0205 PLATZ 2.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0205 - - ahf:112791659 223.402