Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod04g0205 | ATGAGAAAACCTTGCTTTGATTCCTGTCCAATTCATCCTGTCAATAAGAATGAGTTAAATAAATACTGTATAACCTGTGATCAGCCAATTTGCCACTATTGTGCATCAAATCCTACTCATCGGCTGCACAAGACCCTAAAACTCTACAGACATTCTTTCAAAAATGTTGTCTCCCTTGATGCTATGGTAGAGCATATTGACTGCTCAGAAATTCAGCCCTACAAAAGCAATAAGATCTGGATTGTTGCTCTGGAGCCTCTTCCACACTCTGGCAAGGTAAAATGGTGCGAGGCAACACTATGCGACATCTGTAAGATAAAGTTGACTGACCCGACTTTATACCGCTACTGCTCTATTTCTTGCAAGGTCCAAGCTGTTTTAAGGAAGACCGATGATTCAGTTCCTCCCTTCATTTTGCTCGAGAAGGACAGAGAGGATCAAACTGCTGGAGCCAGCAAGCGGCTAAAGAAAAGGAAGCGAACACCCACCAGATCTCCCTTCTTCTGA | 507 | 0.432 | MRKPCFDSCPIHPVNKNELNKYCITCDQPICHYCASNPTHRLHKTLKLYRHSFKNVVSLDAMVEHIDCSEIQPYKSNKIWIVALEPLPHSGKVKWCEATLCDICKIKLTDPTLYRYCSISCKVQAVLRKTDDSVPPFILLEKDREDQTAGASKRLKKRKRTPTRSPFF* | 169 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod04g0205 | 168 | SUPERFAMILY | B-box zinc-binding domain | 8 | 52 | - | - | |
Dod04g0205 | 168 | ProSiteProfiles | Zinc finger B-box type profile. | 9 | 48 | IPR000315 | GO:0008270 | |
Dod04g0205 | 168 | MobiDBLite | consensus disorder prediction | 145 | 168 | - | - | |
Dod04g0205 | 168 | CDD | Bbox2 | 9 | 48 | - | - | |
Dod04g0205 | 168 | Gene3D | Classic Zinc Finger | 6 | 49 | - | - | |
Dod04g0205 | 168 | Pfam | PLATZ transcription factor | 50 | 123 | IPR006734 | - | |
Dod04g0205 | 168 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 1 | 168 | - | - | |
Dod04g0205 | 168 | PANTHER | TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED | 1 | 168 | - | - | |
Dod04g0205 | 168 | MobiDBLite | consensus disorder prediction | 153 | 168 | - | - | |
Dod04g0205 | 168 | Pfam | B-box zinc finger | 8 | 47 | IPR000315 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod04g0205 | Dod-Chr4 | 2516725 | 2521149 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | PLATZ | Dod04g0205 | PLATZ | 2.7e-17 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod04g0205 | - | - | ahf:112791659 | 223.402 |