Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0204 ATGCAAAGGGGTAATGCAGGATATGTGGAATTGGTGGTTTGTGATCAAGAATGCACTAATTTTCTCTCATGGGATGGGAAAGTGGATAAAGTTCTCAAGCCAGAGTGGCTTCAGTCTTTCCTGGGGAAAACTTTCTTTGACTCCTGTACAATTCATCCTGTGCATAAGAATGAGTTAAACAAATACTGTATAACCTGTAATCAGCAAATTTGCCAATATTGTGCATCAGATCCTACTCATCGCCTGCACGAGACACTTAAAATCTACAGACATAGTTTCAAAGATGTTGTCTCCCTTGATGCTATGGAAAAGCATATTGACTGCTCAGAAATTCAGCCCTACCGAAGCAATAAGATGTGGATTATTGCACTGGAGCCTCTTCCGCACAGTGGTTCAGGAAAACGGAGTGAGGCAACATCATGCAACATCTGTGTGAGGAAGCTGGTCGATCCCAATTTATATCGCTACTGCTCCATTTCTTGCAAGGTCCAAGCTGTTTTAAGGAAGCCTGATGTTTCAGTTCCTCCCTTCATCTCCCTTGAAAGTGATACAAAGGAGGAAACTGCTGGACCCAGCCAGCCGGAAAACAAACGAAAGCGAACACCCTGCAGAGCTCGCCTGTTATAA 627 0.437 MQRGNAGYVELVVCDQECTNFLSWDGKVDKVLKPEWLQSFLGKTFFDSCTIHPVHKNELNKYCITCNQQICQYCASDPTHRLHETLKIYRHSFKDVVSLDAMEKHIDCSEIQPYRSNKMWIIALEPLPHSGSGKRSEATSCNICVRKLVDPNLYRYCSISCKVQAVLRKPDVSVPPFISLESDTKEETAGPSQPENKRKRTPCRARLL* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0204 208 CDD Bbox2 49 88 - -
Dod04g0204 208 MobiDBLite consensus disorder prediction 188 202 - -
Dod04g0204 208 Gene3D Classic Zinc Finger 46 88 - -
Dod04g0204 208 MobiDBLite consensus disorder prediction 178 208 - -
Dod04g0204 208 SUPERFAMILY B-box zinc-binding domain 53 88 - -
Dod04g0204 208 ProSiteProfiles Zinc finger B-box type profile. 49 88 IPR000315 GO:0008270
Dod04g0204 208 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 30 207 - -
Dod04g0204 208 Pfam PLATZ transcription factor 90 163 IPR006734 -
Dod04g0204 208 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 30 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0204 Dod-Chr4 2510722 2514880 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Dod04g0204 PLATZ 1.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0204 - - ahf:112791659 243.047