LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g0193	ATGCCCTTGGAGGGGATTTTCATTGAACCATCTTCAACTGCTTCTACCCCTGATCTTTCCCTTCACATAAGCCCTCCAAGCACCTCCTCCTCCTTGATTTGCAACAACACCACCAATTATGGAGCCTTTAACAATTCAGCAGCAACAACCAATACTAGTTTCCATTCTCATCAACAAGCTCACACTGAGCTCTCTCTTGGAAGGAATTTCAGTGGTGGAGGAGGAGGAGCATCATCACCTCCTGAGGAACCACCACACCAACACAAACCTTATTATAACCATGGACAAGGCCATGCCCACCATTTCCATCATCACCTTAACCATCATTCTAACACTAGTCGTACTAGTACCACTACAACAACAACAACAACAAGTACCACTAATACTCACTTGAACCACATAAACTATGGGGTTTCATTGCTTGATGTGTCATCAGAAGGGTTGAGGCCAATCAAGGGGATCCCGGTGTATCATAACCGTTCATTCCCTTTCTTGCCCATGGAGCCTCATCCTAGGGACAAGGATCATCTTCATCACCATAATCATCATCCCAAGATGTGCTTGTATCATCACATGCCTTCTTACCCATCTTTGTCCTCTTCCTGTTCCTCTCTATGCTCCACTACTACTACTACTACCACTTCCCCTAATTCTCCTTCTTCTCCCTATTTCCCTGCAAGTGTGGATCCCATGTCCTTCTTGAACTCCGGTAATGGAACCAACGGCTCCCCCACGGGGGCTTATAGGGCTGCCGCCACAAGGTTCAATGGGATCCCGAGTGAGGCCTTCAAATCTTCTTATCCATTGCACAATCACTCACACTCACACTATGGGCTTGGAGTTGGAGTTGGACCCTCAGATGCATCTTCAGGGTTGATGAGATCGAGGTTCTTGCCAAAGTTGCCAACCAAGAGGAGCATGAGAGCACCAAGAATGCGGTGGACAAGCACCCTTCATGCTCGATTTGTTCACGCTGTTGAGCTTCTTGGAGGCCATGAAAGAGCGACTCCAAAGTCAGTTCTTGAGCTTATGGATGTGAAGGATCTCACATTAGCTCATGTCAAAAGCCATTTGCAGATGTATCGAACAGTTAAGACCACTGACAAGCCTGCAGCTTCTTCAGGGATTTCAGATGGATCCGGAGAGGATGACATGTCTCCAGTGGGAGGCAGCGGTATGCGTCAATTTCCAGACCAAAGAGGCCAACCGGATCGGCAAGTGCAGCAAGATATGGACTATTCTTCGGCCACCACTCTATGGAGTAACAACTCTTCAAGTAGAGAGGCATGGCCACAAGCAAGTTCTAACGACATAGATGGTTTCAGACCACCAGTGTTCCAGTCACAAACCATAGGGCATCAAATTCAGGAGTGTGATTCAGCCCAACTCAAGAACAGTTTGTCATCTGGACCTAATTTAGAGTGCAAGAACCCGAGCTTGGAGTTCACATTAGGCAGACCAGATTGGAATGGCAAAGGACAAGCCTAA	1488	0.4731	MPLEGIFIEPSSTASTPDLSLHISPPSTSSSLICNNTTNYGAFNNSAATTNTSFHSHQQAHTELSLGRNFSGGGGGASSPPEEPPHQHKPYYNHGQGHAHHFHHHLNHHSNTSRTSTTTTTTTTSTTNTHLNHINYGVSLLDVSSEGLRPIKGIPVYHNRSFPFLPMEPHPRDKDHLHHHNHHPKMCLYHHMPSYPSLSSSCSSLCSTTTTTTTSPNSPSSPYFPASVDPMSFLNSGNGTNGSPTGAYRAAATRFNGIPSEAFKSSYPLHNHSHSHYGLGVGVGPSDASSGLMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGISDGSGEDDMSPVGGSGMRQFPDQRGQPDRQVQQDMDYSSATTLWSNNSSSREAWPQASSNDIDGFRPPVFQSQTIGHQIQECDSAQLKNSLSSGPNLECKNPSLEFTLGRPDWNGKGQA*	496

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Dod04g0193	495	PANTHER	TRANSCRIPTION FACTOR KAN2-RELATED	1	495	IPR044847	GO:0000976\|GO:0006355\|GO:0010158
Dod04g0193	495	SUPERFAMILY	Homeodomain-like	307	363	IPR009057	-
Dod04g0193	495	TIGRFAM	myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class	310	363	IPR006447	GO:0003677
Dod04g0193	495	Gene3D	-	309	366	-	-
Dod04g0193	495	MobiDBLite	consensus disorder prediction	93	110	-	-
Dod04g0193	495	MobiDBLite	consensus disorder prediction	365	445	-	-
Dod04g0193	495	MobiDBLite	consensus disorder prediction	51	126	-	-
Dod04g0193	495	MobiDBLite	consensus disorder prediction	464	495	-	-
Dod04g0193	495	MobiDBLite	consensus disorder prediction	51	66	-	-
Dod04g0193	495	MobiDBLite	consensus disorder prediction	401	433	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod04g0193	Dod-Chr4	2400695	2407816	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod04g0193	149	492	G2-like Transcription Factor Family	AT5G16560	46.429	9.91e-78	247

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GARP-G2-like	Dod04g0193		None	None	None

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g0193	-		-	ccaj:109796302	578.941

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod04g0193	04	2400695	2407816	Dod08g0863	08	10427397	10434316	PCT

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