Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0193 ATGCCCTTGGAGGGGATTTTCATTGAACCATCTTCAACTGCTTCTACCCCTGATCTTTCCCTTCACATAAGCCCTCCAAGCACCTCCTCCTCCTTGATTTGCAACAACACCACCAATTATGGAGCCTTTAACAATTCAGCAGCAACAACCAATACTAGTTTCCATTCTCATCAACAAGCTCACACTGAGCTCTCTCTTGGAAGGAATTTCAGTGGTGGAGGAGGAGGAGCATCATCACCTCCTGAGGAACCACCACACCAACACAAACCTTATTATAACCATGGACAAGGCCATGCCCACCATTTCCATCATCACCTTAACCATCATTCTAACACTAGTCGTACTAGTACCACTACAACAACAACAACAACAAGTACCACTAATACTCACTTGAACCACATAAACTATGGGGTTTCATTGCTTGATGTGTCATCAGAAGGGTTGAGGCCAATCAAGGGGATCCCGGTGTATCATAACCGTTCATTCCCTTTCTTGCCCATGGAGCCTCATCCTAGGGACAAGGATCATCTTCATCACCATAATCATCATCCCAAGATGTGCTTGTATCATCACATGCCTTCTTACCCATCTTTGTCCTCTTCCTGTTCCTCTCTATGCTCCACTACTACTACTACTACCACTTCCCCTAATTCTCCTTCTTCTCCCTATTTCCCTGCAAGTGTGGATCCCATGTCCTTCTTGAACTCCGGTAATGGAACCAACGGCTCCCCCACGGGGGCTTATAGGGCTGCCGCCACAAGGTTCAATGGGATCCCGAGTGAGGCCTTCAAATCTTCTTATCCATTGCACAATCACTCACACTCACACTATGGGCTTGGAGTTGGAGTTGGACCCTCAGATGCATCTTCAGGGTTGATGAGATCGAGGTTCTTGCCAAAGTTGCCAACCAAGAGGAGCATGAGAGCACCAAGAATGCGGTGGACAAGCACCCTTCATGCTCGATTTGTTCACGCTGTTGAGCTTCTTGGAGGCCATGAAAGAGCGACTCCAAAGTCAGTTCTTGAGCTTATGGATGTGAAGGATCTCACATTAGCTCATGTCAAAAGCCATTTGCAGATGTATCGAACAGTTAAGACCACTGACAAGCCTGCAGCTTCTTCAGGGATTTCAGATGGATCCGGAGAGGATGACATGTCTCCAGTGGGAGGCAGCGGTATGCGTCAATTTCCAGACCAAAGAGGCCAACCGGATCGGCAAGTGCAGCAAGATATGGACTATTCTTCGGCCACCACTCTATGGAGTAACAACTCTTCAAGTAGAGAGGCATGGCCACAAGCAAGTTCTAACGACATAGATGGTTTCAGACCACCAGTGTTCCAGTCACAAACCATAGGGCATCAAATTCAGGAGTGTGATTCAGCCCAACTCAAGAACAGTTTGTCATCTGGACCTAATTTAGAGTGCAAGAACCCGAGCTTGGAGTTCACATTAGGCAGACCAGATTGGAATGGCAAAGGACAAGCCTAA 1488 0.4731 MPLEGIFIEPSSTASTPDLSLHISPPSTSSSLICNNTTNYGAFNNSAATTNTSFHSHQQAHTELSLGRNFSGGGGGASSPPEEPPHQHKPYYNHGQGHAHHFHHHLNHHSNTSRTSTTTTTTTTSTTNTHLNHINYGVSLLDVSSEGLRPIKGIPVYHNRSFPFLPMEPHPRDKDHLHHHNHHPKMCLYHHMPSYPSLSSSCSSLCSTTTTTTTSPNSPSSPYFPASVDPMSFLNSGNGTNGSPTGAYRAAATRFNGIPSEAFKSSYPLHNHSHSHYGLGVGVGPSDASSGLMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGISDGSGEDDMSPVGGSGMRQFPDQRGQPDRQVQQDMDYSSATTLWSNNSSSREAWPQASSNDIDGFRPPVFQSQTIGHQIQECDSAQLKNSLSSGPNLECKNPSLEFTLGRPDWNGKGQA* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0193 495 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 495 IPR044847 GO:0000976|GO:0006355|GO:0010158
Dod04g0193 495 SUPERFAMILY Homeodomain-like 307 363 IPR009057 -
Dod04g0193 495 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 310 363 IPR006447 GO:0003677
Dod04g0193 495 Gene3D - 309 366 - -
Dod04g0193 495 MobiDBLite consensus disorder prediction 93 110 - -
Dod04g0193 495 MobiDBLite consensus disorder prediction 365 445 - -
Dod04g0193 495 MobiDBLite consensus disorder prediction 51 126 - -
Dod04g0193 495 MobiDBLite consensus disorder prediction 464 495 - -
Dod04g0193 495 MobiDBLite consensus disorder prediction 51 66 - -
Dod04g0193 495 MobiDBLite consensus disorder prediction 401 433 - -
Dod04g0193 495 MobiDBLite consensus disorder prediction 1 22 - -
Dod04g0193 495 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 495 - -
Dod04g0193 495 MobiDBLite consensus disorder prediction 111 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0193 Dod-Chr4 2400695 2407816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0193 149 492 G2-like Transcription Factor Family AT5G16560 46.429 9.91e-78 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod04g0193 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0193 - - ccaj:109796302 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0193 04 2400695 2407816 Dod08g0863 08 10427397 10434316 PCT