LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g0189	ATGCCACCGCCACCACTCTCCACCTTCTTCTGCTTCTTCCTCTGCATTCTCACCACCACCACCATTGCCGCCGCCACCACCAAATTCGACTTCGACACACTGACCCTTACCACCCTGAAGCTCCTCGGCGACGCCCACGTCGTCAACAACACCCTCCTCCTAACCGGCCACCCCCCCGTCCCTAACTCCGCCGCCGGAAGAGCACTCTACTCCCACCCCATCCCCTTCCGCCACCCAACCACCCGCTCCCCCGCCACTTTCTCCACCTTCTTCTCCTTCTCCGTCACAAACCTCAACCCTTCCTCCATCGGCGCCGGCCTCTCCTTCCTCCTCTCCCCCGACCCCCGCTCCCTCGGCCTCCCCGGCCCCTCCCTCGCCCTCGCCGGTACCAGCACCTCCTCCTCCACCTTCCTCGCCGTCGAATTCGACACCCTCATGGACCCCCAACTCAACGACATCAATGGCAACCACGTCGGCGTGGACCTCAACACCGTCGTTTCAACCCAAGCCGCCGATTTGGGAACCCTCGGAATCGATCTCAAGAGCGGGAACACCATCAACGCGTGGATCGACTACGATGCTGGCACCAAAGGGTTCAGCGTTTGGGTCTCTTACTCCAATGTCAAGCCCAAAGATCCGATTTTGAGCATGATTCTCGACGTGGGTGACTATGTCAACGATTTCATGTATGTGGGATTCTCTGGGGCTACGCAAGGTAGTACCGAGGTTCATAGTGTTGAGTGGTGGAGCTTCAGTTCCAGCTTTGATTCTGGGCCGTTGGATTTGGCGCCGCCGCCTCCAACGGCTACTTTGATGAACCCAAGTGCTAGTAGTAATAGTAATAGCAATAATAACAGTAATTCTGTGACGTCGTCGCCACCTTCGACGGCTCCATCTTCTAGTGTTGAGCGGAAGGAGGGTAAATCGGGGTGCCGCAATGGGTTGTGTAAGAATGGTGTTGGTACTGTTGCTGGTGTTGTAACTGCTGGTGCTTTTGTGCTTGCTCTCTTTGCTGGTGCTTTGATTTGGGTGGTGTACTCTAAGAAGGTTAGGCCTTTGAAGAGGCTTGATTCGCTTGGTGAAGGGGTTATTAGAATGCCTAAGGAATTTTCCTATAAGGAGCTTAAGTTGGCCACCGAGTGCTTCAGTCTTAATAGGGTCATTGGTCATGGTGCCTTTGGGACTGTCTATAAGGCAACCTTGCCTGAGAGTGGTGACATTGTTGCTGTGAAAAGATGTAACCATGGTGGTCAAGGGAAGGATGAGTTTCTGTCTGAGTTGTCCATAATTGGGACCCTTAGGCATAGGAACCTTGTTCCTCTTCAAGGCTGGTGCCATGAGAAAGGGGAGATTTTGTTGGTTTATGACTTGATGCCTAATGGGAGTCTTGATAAGGCCTTGTATGAGGCCAGGACACCTCTGCCTTGGATTCACAGGAGAAAAATATTGTTGGGTGTGGCTTCTGTTTTGGCCTATTTGCATCATGAGTGTGAGAATCAGGTGATTCACAGGGACATTAAGACTAGTAACATAATGTTAGATGAGGGGTTTAATGGCCGTTTGGGTGATTTTGGATTAGCCAGGCAGACGGAGCATGACAAGTCTCCAGATGCCACGGTGGCTGCCGGAACGATGGGGTACCTGGCGCCCGAGTACGTTCTCACAGGCAGGGCTACGGAGAAAACTGATGTGTTTAGTTATGGTGCTGTGGTTCTTGAGGTTGCCAGCGGGAGGAGGCCTATAGAGAAAGATGCCAATGGGGTTGGGAGAGTTGGGGTTAGCAGCAATTTGGTAGAATGGGTTTGGAGTTTGCACCAGGAAGGCAAGTTGCTTATGGCAGCTGATCCAAGGCTTGAGGGTGATTTTGAAGATGAGGAAATGAGGAGGGTGCTATTGGTTGGGCTAGCTTGCTCACACCCTGATGCAATGGAAAGACCCACTATGAGGGGTGTTGTTCAAATGCTGCTGGGTGAGGCTGAAGTGCCCATCGTCCCAAGAACCAAGCCATTTACTAGTTATAGTACTTCCCACCTCTTGAAGACCTTGCAAGATAGTGGATCTTCATCTGACCTTAATGCTCTAATCACCATCTCAACCTCCTCATCAGAAAGCAGCTTCAATGATGGAGATATAGTCTGA	2139	0.5208	MPPPPLSTFFCFFLCILTTTTIAAATTKFDFDTLTLTTLKLLGDAHVVNNTLLLTGHPPVPNSAAGRALYSHPIPFRHPTTRSPATFSTFFSFSVTNLNPSSIGAGLSFLLSPDPRSLGLPGPSLALAGTSTSSSTFLAVEFDTLMDPQLNDINGNHVGVDLNTVVSTQAADLGTLGIDLKSGNTINAWIDYDAGTKGFSVWVSYSNVKPKDPILSMILDVGDYVNDFMYVGFSGATQGSTEVHSVEWWSFSSSFDSGPLDLAPPPPTATLMNPSASSNSNSNNNSNSVTSSPPSTAPSSSVERKEGKSGCRNGLCKNGVGTVAGVVTAGAFVLALFAGALIWVVYSKKVRPLKRLDSLGEGVIRMPKEFSYKELKLATECFSLNRVIGHGAFGTVYKATLPESGDIVAVKRCNHGGQGKDEFLSELSIIGTLRHRNLVPLQGWCHEKGEILLVYDLMPNGSLDKALYEARTPLPWIHRRKILLGVASVLAYLHHECENQVIHRDIKTSNIMLDEGFNGRLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYVLTGRATEKTDVFSYGAVVLEVASGRRPIEKDANGVGRVGVSSNLVEWVWSLHQEGKLLMAADPRLEGDFEDEEMRRVLLVGLACSHPDAMERPTMRGVVQMLLGEAEVPIVPRTKPFTSYSTSHLLKTLQDSGSSSDLNALITISTSSSESSFNDGDIV*	713

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod04g0189	712	Gene3D	-	25	260	-	-
	Dod04g0189	712	ProSitePatterns	Legume lectins beta-chain signature.	138	144	IPR019825	-
	Dod04g0189	712	CDD	lectin_legume_LecRK_Arcelin_ConA	43	246	IPR001220	GO:0030246
	Dod04g0189	712	Gene3D	Phosphorylase Kinase; domain 1	353	457	-	-
	Dod04g0189	712	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	501	513	IPR008271	GO:0004672\|GO:0006468
	Dod04g0189	712	MobiDBLite	consensus disorder prediction	262	310	-	-
	Dod04g0189	712	SUPERFAMILY	Concanavalin A-like lectins/glucanases	25	267	IPR013320	-
	Dod04g0189	712	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2	22	708	-	-
	Dod04g0189	712	Pfam	Protein kinase domain	383	652	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod04g0189	712	SMART	serkin_6	382	655	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod04g0189	712	ProSiteProfiles	Protein kinase domain profile.	382	664	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dod04g0189	712	ProSitePatterns	Protein kinases ATP-binding region signature.	388	411	IPR017441	GO:0005524
	Dod04g0189	712	Gene3D	Transferase(Phosphotransferase) domain 1	458	661	-	-
	Dod04g0189	712	SUPERFAMILY	Protein kinase-like (PK-like)	365	688	IPR011009	-
	Dod04g0189	712	MobiDBLite	consensus disorder prediction	272	303	-	-
	Dod04g0189	712	CDD	STKc_IRAK	388	655	-	-
	Dod04g0189	712	Pfam	Legume lectin domain	27	256	IPR001220	GO:0030246
	Dod04g0189	712	PANTHER	-	22	708	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod04g0189	Dod-Chr4	2302830	2305601	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod04g0189	6	694	Receptor kinase-like Gene Family	AT3G53380	64.387	0.0	859

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Dod04g0189		Pkinase	3.4e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g0189	-		-	gmx:100793157	907.516