Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod04g0146 | ATGGAGCTGACCCAATCCAACTCTCTTCTTCAACACCAAGAAACCTCAACCTCAGGTTCCGCACTTTCACGGCCCCATAATGACCCTGCAATTGAAGATGGGGAGGAGGAGGAATCATTGTTTGATTCCATGGTTTGTGACTCCAGCTCAAGGCTCATCCCAGCTGGGTTCACTAAATCCAACAAAACAGATGAGTATGTGTTGTTTGTAAATGCTGGAGGAGAGGCTATAAATGAAGCAGATGCTGGAATAACTTTCCTGGGTGACAGATTTTATGAGGGTGGGAACGTCATGCGTACCAACGAACAAATAGTGGAAGGTGGAGATTATCCATTCATCTACCAATCAGCACGGATCGGAAGTTTTAGTTATAGATTTGATAATCTTCCTCCTGGAGACTATATTGTTGATCTCCATTTTGTGGAGATCATTAACACAAATGGGCCAAAAGGAATAAGGGTGTTCAATGTATACATCCAAGAAGAAAAGGTTCTATCTGAACTGGATATCTTTGCAGTTGTTGGAGCTAATAAGCCGCTGCAATTGACTGATTCAAGGGTTTCTGTGAATGAGGATGGGGTACTTCACATCAGATTTGAAAGTATTAACGGAAGTCCGTTGGTTAGTGGGATTTGCATTAGGAAAGCGACAAAGGCGACAGTTCCACAAGTGACAAAGGATTACATTAAATGTAACTGCTGTACTGCACAGATTGAAATTCCTTCATCACAGATGAAAGTTTTGCAAACAAAATCTACTGCAAAGTATGAGAAGAAGATCAAAGAGCTTACTATGCAGTGTCAGCTCAAGACAAAAGAATGCTACGAGGCATGGATGTCATTGACTGCAACAAATGAGCAATTGCAAACAATCCAGATGGAACTTGACAAAGTGACATTTAGGACACTCTCTCTTGATCAAACTTTGGAGAAGCAGACTGAAAACCTGAAGATTATTTCTAGTAGATACGAGCTTGACAAGAAGAAATGGACAGAAGCAATTAGCAGTTTACAGGAAAAAATAAAGTTGATGAAGAGTGAATATTCTCAACTTTCTTATGAAGCACATGAATGTGTTGATTCAATCCCAGAATTAAATGAGATGGTTTTTGCAGTACAGCAGTTGGTAAAGCAGTGTGAAGATCTCAAAGTGAAATACAATGAGGAAATGACGAAGAGAAAGAAGCTCTTTAATGAAGTTCAAGAGGCTAAAGGGAACATTCGAGTTTTCTGCCGATGTCGTCCATTGAATAAGGATGAAATCTCAGCTGGGTGTACAACAGTTGTGGATTTTGATGCAGCAAAAGATGGATGCATTGGAATTTCCACAGGTGGCTCCATGAAAAAAGCATTCAGATTTGACAGAGTTTATGCACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCCTCGTCGATGGTAATATCTGTGCTGGATGGCTTCAATGTTTGCATATTCGCTTATGGGCAAACAGGAACAGGAAAGACATTTACCATGGAGGGAACAGATCAAAATAGAGGAGTAAATTACAGGACTCTTGAGCTCTTGTTTAAAATTGCCAAGGAAAGGAGTGATACATTTGCATATGACATATCTGTTAGTGTCCTTGAGGTTTATAATGAGCAAATCAGAGACCTATTGGCTACAGGACCAGCAACAAAAAGGTTGGAGATAAAACAAAATTCTGAAGGATCTCATCATGTTCCTGGTGTTGTAGAAGCCGAGGTTGATAACATTAAGGAAGTGTGGAATGTCATGCAGGCTGGAAGTAATGCTAGAGCAGTTGGAAGTAATAACATCAATGAGCATAGCAGTCGATCTCACTGCATGCTTTGTATAATGGTAAGGGCAAAAAATTTGATGAATGGTGAGTGCACCAAGAGCAAGCTTTGGCTTGTAGATTTGGCAGGCAGTGAGAGACTTGCAAAGACTGATGTGCAAGGGGAACGACTTAAGGAAGCACAAAATATCAATAGATCTCTTTCAGCTCTCGGGGATGTTATATCTGCTTTAGCAACCAAAAGCAGTCACATTCCATATAGGAACTCAAAATTGACACATTTACTTCAAGACTCGCTAGGAGGTGACTCCAAAACTTTGATGTTTGTACAAATCAGTCCTTCAGACCAGGACTTAGGTGAGACTCTGAGCTCACTTAATTTTGCAACTCGAGTGCGAGGGATTGAATTAGGTCCGGTTAAGAAGCAAATTGATACAAGTGAACTTCAAAAGATGAAAGCAATGCTTGAGAAGGCAAGGAACGAGTGCAAAATGAAAGACGATTCCATGCGGAAGCTAGAAGAAAATTTGCAAAGCATTGAGAATAAGGCCAAAGGCAAGGATCTTATTCACAGAAATCTACAAGAAAAGATCAAAGAACTTGAAAGTCAAATTGAATTAAAGACAGCCGTGCAAAACCAGTCGGAGAGGCAAGTTTTTCAACTGTCAGACAAATTGAAGGCAAAAGAAGAAACCTGCAGTATTCTCCAACATAAGGTCAAAGAGCTAGAGAGAGATATGAAAGAACAACTGCAAGCGGAGACAGCAAAATTTCAACACAAGGTTTGGGATCTAGAGAAGAAACTGAAAGATCAGTTGCAGGAATCTGAGTCTCAGTCTGCTACACTAAAAGATAAGGTTGAAGAGCTTGAGAGAAAACTGAAAGAGCAGGAACAGAGCTCAGAGTCGTTGGTTCATCAGAAGTTGAAGGAAGCTGAGGAAAGGTTCAGGGAAAGAGAGCAGCAGTGGCAACAAGCTCATTACTTAGCTGATGCAGCAAAAGCCACACCTGATGTAAGTAAAAGCTGCATGAGTGATGACAGTGAGATGGATCGTCCCATTTTAAAGAGTTCAAACTCGGTGAACCGCCAGGTGAATCAAGGTTCTACCATGTTAAGAAGTAAAAGAGCATCAGAAAACAATTTTGTCATACCATCATCCTCTTTACACGGTAGCAAAATCACAAGAAAATCTGATCCTCCTAAAATAGGAAGGGTTGGACTTGGACAGGCAACAAACCTAAAACCTAAAGAGAATCAAGCTCCATTGACTCAGAAGAGAGCTATTAGAGACCAGGTTCAAGGCATTAGGGAGAGGGACAACAAGAAGAAAATTTGGTCAAGATAG | 3126 | 0.4056 | MELTQSNSLLQHQETSTSGSALSRPHNDPAIEDGEEEESLFDSMVCDSSSRLIPAGFTKSNKTDEYVLFVNAGGEAINEADAGITFLGDRFYEGGNVMRTNEQIVEGGDYPFIYQSARIGSFSYRFDNLPPGDYIVDLHFVEIINTNGPKGIRVFNVYIQEEKVLSELDIFAVVGANKPLQLTDSRVSVNEDGVLHIRFESINGSPLVSGICIRKATKATVPQVTKDYIKCNCCTAQIEIPSSQMKVLQTKSTAKYEKKIKELTMQCQLKTKECYEAWMSLTATNEQLQTIQMELDKVTFRTLSLDQTLEKQTENLKIISSRYELDKKKWTEAISSLQEKIKLMKSEYSQLSYEAHECVDSIPELNEMVFAVQQLVKQCEDLKVKYNEEMTKRKKLFNEVQEAKGNIRVFCRCRPLNKDEISAGCTTVVDFDAAKDGCIGISTGGSMKKAFRFDRVYAPKDDQVDVFADASSMVISVLDGFNVCIFAYGQTGTGKTFTMEGTDQNRGVNYRTLELLFKIAKERSDTFAYDISVSVLEVYNEQIRDLLATGPATKRLEIKQNSEGSHHVPGVVEAEVDNIKEVWNVMQAGSNARAVGSNNINEHSSRSHCMLCIMVRAKNLMNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISALATKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDLGETLSSLNFATRVRGIELGPVKKQIDTSELQKMKAMLEKARNECKMKDDSMRKLEENLQSIENKAKGKDLIHRNLQEKIKELESQIELKTAVQNQSERQVFQLSDKLKAKEETCSILQHKVKELERDMKEQLQAETAKFQHKVWDLEKKLKDQLQESESQSATLKDKVEELERKLKEQEQSSESLVHQKLKEAEERFREREQQWQQAHYLADAAKATPDVSKSCMSDDSEMDRPILKSSNSVNRQVNQGSTMLRSKRASENNFVIPSSSLHGSKITRKSDPPKIGRVGLGQATNLKPKENQAPLTQKRAIRDQVQGIRERDNKKKIWSR* | 1042 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod04g0146 | 1041 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
| Dod04g0146 | 1041 | PANTHER | KINESIN-LIKE PROTEIN KIN-14R | 35 | 1031 | - | - | |
| Dod04g0146 | 1041 | Pfam | Kinesin motor domain | 412 | 728 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Dod04g0146 | 1041 | ProSitePatterns | Kinesin motor domain signature. | 628 | 639 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
| Dod04g0146 | 1041 | Gene3D | Kinesin motor domain | 348 | 730 | IPR036961 | - | |
| Dod04g0146 | 1041 | PRINTS | Kinesin heavy chain signature | 598 | 615 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Dod04g0146 | 1041 | PRINTS | Kinesin heavy chain signature | 480 | 501 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Dod04g0146 | 1041 | PRINTS | Kinesin heavy chain signature | 629 | 647 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Dod04g0146 | 1041 | PRINTS | Kinesin heavy chain signature | 678 | 699 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Dod04g0146 | 1041 | Coils | Coil | 819 | 900 | - | - | |
| Dod04g0146 | 1041 | MobiDBLite | consensus disorder prediction | 1024 | 1041 | - | - | |
| Dod04g0146 | 1041 | Coils | Coil | 372 | 406 | - | - | |
| Dod04g0146 | 1041 | ProSiteProfiles | Kinesin motor domain profile. | 406 | 728 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Dod04g0146 | 1041 | Coils | Coil | 735 | 811 | - | - | |
| Dod04g0146 | 1041 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Dod04g0146 | 1041 | CDD | KISc_C_terminal | 404 | 730 | - | - | |
| Dod04g0146 | 1041 | MobiDBLite | consensus disorder prediction | 977 | 1041 | - | - | |
| Dod04g0146 | 1041 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 406 | 764 | IPR027417 | - | |
| Dod04g0146 | 1041 | Coils | Coil | 327 | 354 | - | - | |
| Dod04g0146 | 1041 | Gene3D | - | 62 | 219 | - | - | |
| Dod04g0146 | 1041 | Pfam | Malectin domain | 67 | 211 | IPR021720 | - | |
| Dod04g0146 | 1041 | SMART | kinesin_4 | 404 | 736 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Dod04g0146 | 1041 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 35 | 1031 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod04g0146 | Dod-Chr4 | 1589792 | 1598061 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod04g0146 | 354 | 781 | Calmodulin-binding Proteins | AT5G65930 | 40.092 | 1.52e-86 | 302 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod04g0146 | K10406 | - | gmx:100782704 | 1570.06 |