Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0145 ATGCCACTACTTCACACATTCACCAAATCCCTTTTCCCACACGCTCCATGGAGCGTGCAAACCATCCACCTCGAAACGACGTCACATCCAGCCTTAAACATAGCGCGTGGATACACTCGCTCTCAGATTACTAACGACTTAGATAGAAAACCTAAACCAAATAAGAGATTAAGATACAGAGAGAGAAAGGAGTTGTCGTTGCTGCTTATTAAAACTAGTGGGCGTCCCGATCCAATTTTGTGGGCAACCCCTTCAAAAATTTCCCTCACTTTCTTTCCATTCCATACATGTAATATTTTCTCACCAGTCAAACAGGCCAAGTTCATCACAGTAAGGATCTTTATTTTGGCATCTTCCATGGAGACTCAAAATCAATCAGAGCCTACAGAAGGATTAATAAGGATGCTTCCTCCACCCCCTGGAACTTTCCAAGATCGTGAAGACCTTATTAAACATGTTCGTGACTTTGGTGCCAATCAAGGATATGTTGTGACCATCAAGAAGTCCAGAAAGGATAGAAGAGTCATCCTTGGCTGTGACAGAGGAGGTGTCTATCGTAACAGGCGCAAAATTGATGAAAGTAACCGCAAAAGGAAAGTAACTTCACGCCTTATAAACTGTCCATTTGAAGCCGTAGGTAAAAAGGAAGATGACATGTGGGTACTCAATATAAAAAATGGAGATCACAATCATGAACCATTGAAAGACATGTCAGAACATCCTTATAGTCGACGTTTCACTGATGAAGAAGTGAGACAAATCAAACAGATGACTGAAGCTGGTGTAAAACCTCGTCAAGTGCTTAAAGCTCTCAAGCAAAGCAATCCAGAATTGCAGTCAACGCCAAGGCATTTGTATAACCTCAAAGCAAAGATTCGACAGGGAAATCTATCAGGTTTTCATCATTCTGGCAAACAGTCCTGTACAATACAAGTAACTAGACTAGTAAAGGTTCCTAATTTTATTGGGGGTAAATGCATAGATTCTCAAGGTTGTGATCTAATTGATGTTACAAATCCTGCAACACAAGAAGTTGTATCTCAAGTTCCTTTGACTACATATGAAGAGTTTAAAGCTGCTGTTAATGCTGCCAAGCAAGCTTTTCCTTCATGGAAAAACACTCCTATCACCACTCGTCAACATATTATGTTTAAACTTCAGGATCTTATCCGCAGAGATATTGATAAGCTTGCCATGAGTATCACCATAGAACAGGGCAAGACATTAAAAGGTGCCCGAGGAGATGTGCTTCGTGGTTTAGAGATGGTGGAGCATGCTTGTGGGATGGCAAATCTGCAAATGGGGGAGTTTGTTCCTAATGCTTGTAATGGAATTGATACATACTGCATCAGAGAGCCCCTTGGAGTTTGTGCTGGAATATGCCCCATCAACTTTCCGGCAATGACACCCTTGTGGATGTTCCCTATTGCGGTTACATGTGGCAACGCTTTTATTCTCAAGCCATGTGAAAAAAATCCAGGTGCTTCAATGATACTTGCAGCACTAACAATGGAGGCTGGTTTGCCTGATGGCGTTTTAAATATTGTTCATGGAACTCATGAGATTGTTAATTACATATGCGATGATGAGGATATAAAAGCTGTGTCATTTATTGGTCCAATTATGGCTGGAATGCACATCTATGCAAGGGCCGCTGCTAGAGGAAAGCGTGTTCAGTCAAATGCAGGTGGCATAAATCATGTAGTTGTTTTGCCGGATGCTAGCGTGGATGCTACTCTAGATGCTCTTGTTCCTGCTGGCTTTGGTGCAGCAGGAGAGAGGTGCATGGCTTTAAACACAGCTATTTTTGTGGGAGGTTCAATGCAATGGGAAGAAGAACTAGTGCAGCGTGCCAAAGTACTTAGAGTGAATACAGGAACAGATCCTGGTTCAGACCTTGGTCCAGTTATTAGCAAAGAGGCAAAGGAGACAGCATGTAAACTAGTTCAGAATGCTGTTGAAAATGGTGCAAGACTTCTACTGGATGGAAGACATATTGTGGTACCAGGTTATGAAAATGGAAACTTTGTTGGTCCTACCATCTTATGTGATGTTACGACTGACATGGAGTGTTATAAGGAAGAAATTTTCGGACCAGTTCTACTTTGCATGCAGGTTGACAACCTAGATGAGGCTATATCAATAATAAATAAAAACAGATATGGAAATGGAGCTTCTATATTCACCACATCTGGTATGGCTGCAAGGAAGTTCCAGAATGAGGTTGAGGCTGGACTGGTTGGGATCAATATGCCTGTACCTGTCCCCTTACCATTTTCCTCTGATGGGTCCAAGGCATCTTTCGCCGGTGATTTCCATTTTTGTGGAAAAGCAGGAGTACAGTTCTATACCCAAATCAAAACAGTGGCACAACAATGGAAGGATTTCCCAAGAATAGGAGTATCAACTGCTGCATGTCCATCTGAGAGAGAATCATCTAGGCAATTGGCACCACAAACCATGCCTATGGAATCTGAGAGTAATTCACCAACCTATGAAGTACAACTAGCCATCACTGATGCAGATATACATAACACAGATATGTCATCTGCATCTCCATCAACTGATAAGGATACCAGAATCCAAGATGTTTCCCTTGTTCTACCTTCAACATCTGAGAGGGATCTATCAGATCAGGATATATCACTGGTATCATCACCTGCATTGCAGAGGGATTTACCGAGCCACATATTACCTGGAGCCACGTCACAGGCATCAGCAGAGAGGAGTTGTGTTTCCAAAACATCTCAGTGGAACGAAAGTTCGCCTACAACATCTCAAAGAAGTGAGACTATTCCCCTATCATCTGAGAGGAGTCATGTGTCTGCATCTTAG 2835 0.4226 MPLLHTFTKSLFPHAPWSVQTIHLETTSHPALNIARGYTRSQITNDLDRKPKPNKRLRYRERKELSLLLIKTSGRPDPILWATPSKISLTFFPFHTCNIFSPVKQAKFITVRIFILASSMETQNQSEPTEGLIRMLPPPPGTFQDREDLIKHVRDFGANQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESNRKRKVTSRLINCPFEAVGKKEDDMWVLNIKNGDHNHEPLKDMSEHPYSRRFTDEEVRQIKQMTEAGVKPRQVLKALKQSNPELQSTPRHLYNLKAKIRQGNLSGFHHSGKQSCTIQVTRLVKVPNFIGGKCIDSQGCDLIDVTNPATQEVVSQVPLTTYEEFKAAVNAAKQAFPSWKNTPITTRQHIMFKLQDLIRRDIDKLAMSITIEQGKTLKGARGDVLRGLEMVEHACGMANLQMGEFVPNACNGIDTYCIREPLGVCAGICPINFPAMTPLWMFPIAVTCGNAFILKPCEKNPGASMILAALTMEAGLPDGVLNIVHGTHEIVNYICDDEDIKAVSFIGPIMAGMHIYARAAARGKRVQSNAGGINHVVVLPDASVDATLDALVPAGFGAAGERCMALNTAIFVGGSMQWEEELVQRAKVLRVNTGTDPGSDLGPVISKEAKETACKLVQNAVENGARLLLDGRHIVVPGYENGNFVGPTILCDVTTDMECYKEEIFGPVLLCMQVDNLDEAISIINKNRYGNGASIFTTSGMAARKFQNEVEAGLVGINMPVPVPLPFSSDGSKASFAGDFHFCGKAGVQFYTQIKTVAQQWKDFPRIGVSTAACPSERESSRQLAPQTMPMESESNSPTYEVQLAITDADIHNTDMSSASPSTDKDTRIQDVSLVLPSTSERDLSDQDISLVSSPALQRDLPSHILPGATSQASAERSCVSKTSQWNESSPTTSQRSETIPLSSERSHVSAS* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0145 944 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 563 762 IPR016163 GO:0016620
Dod04g0145 944 SUPERFAMILY ALDH-like 310 795 IPR016161 GO:0016491
Dod04g0145 944 MobiDBLite consensus disorder prediction 804 830 - -
Dod04g0145 944 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 337 770 IPR016162 GO:0016491
Dod04g0145 944 MobiDBLite consensus disorder prediction 893 944 - -
Dod04g0145 944 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 120 908 - -
Dod04g0145 944 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 319 793 IPR010061 GO:0004491
Dod04g0145 944 MobiDBLite consensus disorder prediction 897 944 - -
Dod04g0145 944 CDD ALDH_F6_MMSDH 318 793 IPR010061 GO:0004491
Dod04g0145 944 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 120 908 IPR010061 GO:0004491
Dod04g0145 944 Pfam Aldehyde dehydrogenase family 329 789 IPR015590 GO:0016491
Dod04g0145 944 MobiDBLite consensus disorder prediction 806 830 - -
Dod04g0145 944 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 588 599 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0145 Dod-Chr4 1578910 1589115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0145 317 777 Aldehyde Dehydrogenase Gene Family AT2G14170 72.511 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0145 K00140 - gmx:100796803 1316.6