Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0138 ATGAGGCAGACCAAGGGAAGAAAGAGAGAGAACAAAGCAAACAAAGAAATGGAACTTGTTGCTGGTAATAACAACAGCAGAAAAGAGGTTATTCCATTTCCACATGCATACGATGATGAAGTGTCATCATCACCAAGGGACGTGTTCGAGGTGCCAATATCTAGCACGGATTCAGACAGCACGACGGAGAGCAGCAACTGCAGCACATGGTCGCCGCCGGGGAAGGCGGGGTTGCCACGGCCGAACAACAATGGGAAGGATGATAACGGGAAGCAGTGGAGGAAGGCCATGATCGATGCCTTGAGGTTCAAGTCTGTTAGAAGGTTCTCGACGATTCCTTTGCTTGCAGCGAGCTATGAGATATCGAGGAGGAGCCTGAGGAAGAAGCTGGCTCGCTTGAGAATAGGGGAAGATGATGATGATGAGGATGCTGGGATTTATCTTGACAGTATTCCTACCAAGCCTTCTTGGAGGAACTTCTCCTACGTTGACCTCGCTGTTGCTACTGACAATTTCAACCCTGAGGACATGATTGGGAAAGGTGGTCATGCTGAGGTCTACAGAGGGCGCCTACCAGATGGTCAAGTTGTAGCTGTGAAGAGGCATATGAAGAATGAGAAGGAAGTTGAAGACAGAGTTGGTGATTTCTTGTCAGAGCTTGGGATCATTGCTCACATAAACCACCCAAATACAACACGCTTGATGGGGTTTGGCATTGACCGTGGCCTCTACTTTGTCCTACAATACGCCCCACGTGGCAGCCTTGCCTCTTTGCTCTTTGGTCCTGGATGCTTGGAGTGGAAGATAAGGTTCAAGGTGGCTATTGGGGTAGCAAAAGGATTGGAGTATCTCCATCATGATTGCCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCAAACATATTACTCAACCATAGCCATGAAGCTGAGATTTCAGATTTTGGACTGGCGAAGTGGCTCCCAGATAAGTGGGACCACCATGTTGTCTTCCCAATCGAAGGCACATTCGGGTATTTGGCTCCAGAGTACTTTATGCATGGAATTGTGGATGAGAAGACTGATGTTTTCGCATTCGGGGTATTGCTACTGGAGCTCATCACAGGTCGTCGTGCAGTTGATTCAAATAGTAGGGAAAGTCTTGTGATTTGGGCCAAACCACTGCTGGATGCAAAGAAGGTCAAGGAAATAGCAGACCCCAGATTAGGAGACCAATATGATCCCACAGAAATGAAGAATGCCATGGCAACAGCTTCCATGTGTGTCCACCACATGTCCGCCAAGCGACCGTTCATGAATAAGGTTCTGCAGCTGCTGAAAGGGGAAGAGGTGGCTATTGAGCTCAACCAAAAGTCAATAGCTCCAAGATCACTATTGATAGATGCATGTGACCTAGAAGATTATACATGCTCTAATTATTTGAATGACCTCAATCGCCACAAACAATTAATCATGGAGTGA 1461 0.4716 MRQTKGRKRENKANKEMELVAGNNNSRKEVIPFPHAYDDEVSSSPRDVFEVPISSTDSDSTTESSNCSTWSPPGKAGLPRPNNNGKDDNGKQWRKAMIDALRFKSVRRFSTIPLLAASYEISRRSLRKKLARLRIGEDDDDEDAGIYLDSIPTKPSWRNFSYVDLAVATDNFNPEDMIGKGGHAEVYRGRLPDGQVVAVKRHMKNEKEVEDRVGDFLSELGIIAHINHPNTTRLMGFGIDRGLYFVLQYAPRGSLASLLFGPGCLEWKIRFKVAIGVAKGLEYLHHDCPRRIIHRDIKASNILLNHSHEAEISDFGLAKWLPDKWDHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPLLDAKKVKEIADPRLGDQYDPTEMKNAMATASMCVHHMSAKRPFMNKVLQLLKGEEVAIELNQKSIAPRSLLIDACDLEDYTCSNYLNDLNRHKQLIME* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0138 486 PANTHER OS08G0249100 PROTEIN 2 486 - -
Dod04g0138 486 ProSitePatterns Protein kinases ATP-binding region signature. 178 200 IPR017441 GO:0005524
Dod04g0138 486 MobiDBLite consensus disorder prediction 48 72 - -
Dod04g0138 486 MobiDBLite consensus disorder prediction 1 90 - -
Dod04g0138 486 Gene3D Transferase(Phosphotransferase) domain 1 251 455 - -
Dod04g0138 486 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 2 486 - -
Dod04g0138 486 SMART serkin_6 172 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0138 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Dod04g0138 486 SUPERFAMILY Protein kinase-like (PK-like) 152 439 IPR011009 -
Dod04g0138 486 ProSiteProfiles Protein kinase domain profile. 172 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0138 486 Gene3D Phosphorylase Kinase; domain 1 148 249 - -
Dod04g0138 486 Pfam Protein kinase domain 175 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0138 Dod-Chr4 1523585 1527915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0138 156 462 Trihelix Transcription Factor Family AT5G38560 41.509 3.62e-68 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod04g0138 Pkinase 8.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0138 - - gmx:100794225 695.271