Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0120 ATGGACGAGGCTTTCGACCCTGCAACCTCAAGCCTTCTGTGTCTGGAGAACAATAACACATGTTTTGATGATTTTGAATGTAATGCCGCAGATGGGTCGGGTATTTCTCCCTCATGGGACCACAAAAACCTTAACTTTAACGATCAATGTCTGAGCAGAGGCAACCATGGATCGGAACCATCATTCATTGGTTTCCTCGTGCAGAGTGATGAAATTTTTGGGCTTATGGTTGAGAGGGAGAAGGAGCATTTGCCCAGGGATGATTACTTGATGAGGCTGCGTAGGGGGGACTTGGACTTGAGTGTTAGGAGGGAGGCTCTTGATTGGATTTGGAAGGCTCATGCCTACTATGGTTTTGGACCCTCTAGCTTTTGTCTATCTGTCAACTACTTGGATCGGTTCTTATCAGTATATGAATTGCCAAAAGGCAAAAGTTGGGCTGTGCAATTGTTAGCCGTGGTGTGTTTTTCAATTGCTGCCAAAATGGAGGAGACTAAAGTGCCTCAGACTGTAGATTTGCAGGTTGAAGAACCAAAGTTTGTATTTGAAGCTAAAACCATTCAAAGAATGGAACTACTAGTATTAAGCACATTGAGATGGAAAATGCAAGCTCTAAATCCATGTTCCTTCATAGATTACTTCCTTAGCAAGATCACTCAGGAGCAGCATCCGGCACAGTCATCCATTTTGAGATCTGTCGAGCTCATCCTTAGCATAATCAGATGTGTTGATTTCTTGGAATTCCGGCCTTCCGAAATTGCTGCAGCAGTTGCAATTTCTGTTTCAATGGAATTGCAATCAAAAGAGCTTGATAAAGCCTTAAATAGTATTATCATTGTAGAGAAGGACAGAGTTTTGAAGTGCCTTGACCTGATCAAAGATTTGTCCTTGATCAAAGTTTCAGCTAATTTGGCCGGTAAATTAGTGCCATTTGTACCACAAAGCCCTGTTGGGGTGCTGGATGCTACATGCTTGAGCTATAAGAGTGATCAATTAACAGTTGGATCATTTACAAATTCTTCCCAATATAGTCCAAATGCTTAG 1044 0.4215 MDEAFDPATSSLLCLENNNTCFDDFECNAADGSGISPSWDHKNLNFNDQCLSRGNHGSEPSFIGFLVQSDEIFGLMVEREKEHLPRDDYLMRLRRGDLDLSVRREALDWIWKAHAYYGFGPSSFCLSVNYLDRFLSVYELPKGKSWAVQLLAVVCFSIAAKMEETKVPQTVDLQVEEPKFVFEAKTIQRMELLVLSTLRWKMQALNPCSFIDYFLSKITQEQHPAQSSILRSVELILSIIRCVDFLEFRPSEIAAAVAISVSMELQSKELDKALNSIIIVEKDRVLKCLDLIKDLSLIKVSANLAGKLVPFVPQSPVGVLDATCLSYKSDQLTVGSFTNSSQYSPNA* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0120 347 SMART cyclin_7 108 196 IPR013763 -
Dod04g0120 347 ProSitePatterns Cyclins signature. 103 134 IPR006671 -
Dod04g0120 347 PANTHER CYCLIN-D4-1-LIKE 63 344 - -
Dod04g0120 347 Pfam Cyclin, N-terminal domain 71 202 IPR006671 -
Dod04g0120 347 CDD CYCLIN 103 195 IPR013763 -
Dod04g0120 347 PANTHER CYCLINS 63 344 IPR039361 -
Dod04g0120 347 Pfam Cyclin, C-terminal domain 206 296 IPR004367 -
Dod04g0120 347 Gene3D - 76 290 - -
Dod04g0120 347 SUPERFAMILY Cyclin-like 66 202 IPR036915 -
Dod04g0120 347 Gene3D - 86 203 - -
Dod04g0120 347 SMART Cyclin_C_2 205 340 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0120 Dod-Chr4 1383450 1385837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0120 44 338 Core Cell Cycle Gene Families AT2G22490 51.935 1.22e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0120 K18810 - gmx:100800570 447.973