Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0099 ATGGCTTCTCTTACTCAGTTTCTTATTCTTCTTTTCCCACTGCTGGCAACTTCATTTATCGCAGTTTTGGCCTTTCAAAATCCGGCTCCATTTAGTTGCTTTGAAAATATCAGGACATGCACTGCCTCACTCTACCACATAAGCCATAATTTCAAGCTTGAAGACATTGCGTTTTATTACTCAGTTGATTCTTCGCAAATCAAGCCTATAATGCACGGCAAAAAGCAAGATTACCTCATAGCAGTGCCTTGCTCTTGCAAAAACACCAATGACCCTAGCGGATATTTTTATAACACAACATACAGAGTGAAGAATGGTGACACTTTTGAGAATATATCAAATCACGTTTACAGTGGACAAGCCTGGCCAGTTAATGGTAGATGGGATCCAGATCAGAATTTAACAATACAAATTCCATGTGGTTGCTCAGAAGATAAGTCTCAAAGTGTTATCACCTACACTGTCCAACCGAATGATACACCAGCAGCGATTTCCCTTCTGCTAAATACTACAGTGCCTGCCATGCAGACCATGAACGAAGCTCTGGCTCAGAATCCTGACCTCATAGTTATTGGTTGGATACTATATGTTCCTTTGGAATTGAATGGGGTTCCTCCACCTCCAAGCGGAAAAGAAAAGAAACATATGTTGACAATAATCATCGGTATCTTAGCGGGCTTGACATTACTTTCAATCATCATAAGCTTCACCCTTCTCATTCTCAGGGGAAAAAGAGCACATCAAATCAGCAAAGAAGATTCAACCATTGTCTCTAAAAGATCAATTGCCAATAGAAATATTTCCTTGCAGACATCTAACATTTACAAAGAATATATGGGAGATGTAATGCAACTTGAATCAGAAAGACCAGTAACATATAGTCTTGAGGAGATTGAAGATGCCACAAATAACTTTGATGAAGCTTGCAGGATCGGAATTGGTGGATATGGAAGTGTTTATTTTGGAATGTTAGGGCAGAAGGAGATTGCTGTGAAGAAGATGAGGTCTAATAAAACTAAAGAGTTCTTCGCAGAACTCAAGGCCTTGTGTAAGATCCATCATATCAACATTGTTGAGCTGCTGGGATATGCCAGCGGGGAAGATTACCTCTATTTGGTGTATGAGTATGTTCCAAATGGATCTCTAAGTGACCATCTTCATAATCCATTACAGAAAGGCAACCAGTCTCTTTCTTGGAATGCAAGGGTTCAGATTGCACTGGATGCTGCAAAAGGTCTTGAATACATACATGACCATACAAAAGCACGATATGTACACCGTGACATAAAGACTAGCAATATTCTAATTGATGAGAAGCTCAGAGCAAAGGTAGCAGATTTTGGACTTGCAAAGCTGGTAGACCGAACCAATGATGAAAATTTTTTAGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCCGAAGCTGTGAAGGAGCTTCGGGTGACCCCAAAAACTGATGTGTTTGCATTTGGAGTGGTTCTGTTGGAGCTGATAACAGGGAAACGTGCTCTATTTCGTGACAGCCAGGGAACAAGCACCAAAATGAAATCACTTATTTCAGTTGTACATAAAATATTCCAAGATGCTGAGCCAGAAACTGCTTTAGAAGATGTCATAGATAGGAATCTTGAATCTAGCTATCCGATGGAAGATGCCTACAAGATGGCAGAAATAGCTAGGTGGTGCTTGCAAGAAGAGGTAGTGGAAAGGCCTGAAATGAGGGATATAGTTGGGGCATTGTCACAGATTGTGATGTCCTCCATAGAGTGGGAAGCATCTCTAGGTGGGAACAGCCAGGTCTTCAGCGGCTTGTTTGATGGAAGATGA 1833 0.4113 MASLTQFLILLFPLLATSFIAVLAFQNPAPFSCFENIRTCTASLYHISHNFKLEDIAFYYSVDSSQIKPIMHGKKQDYLIAVPCSCKNTNDPSGYFYNTTYRVKNGDTFENISNHVYSGQAWPVNGRWDPDQNLTIQIPCGCSEDKSQSVITYTVQPNDTPAAISLLLNTTVPAMQTMNEALAQNPDLIVIGWILYVPLELNGVPPPPSGKEKKHMLTIIIGILAGLTLLSIIISFTLLILRGKRAHQISKEDSTIVSKRSIANRNISLQTSNIYKEYMGDVMQLESERPVTYSLEEIEDATNNFDEACRIGIGGYGSVYFGMLGQKEIAVKKMRSNKTKEFFAELKALCKIHHINIVELLGYASGEDYLYLVYEYVPNGSLSDHLHNPLQKGNQSLSWNARVQIALDAAKGLEYIHDHTKARYVHRDIKTSNILIDEKLRAKVADFGLAKLVDRTNDENFLATRLVGTPGYLPPEAVKELRVTPKTDVFAFGVVLLELITGKRALFRDSQGTSTKMKSLISVVHKIFQDAEPETALEDVIDRNLESSYPMEDAYKMAEIARWCLQEEVVERPEMRDIVGALSQIVMSSIEWEASLGGNSQVFSGLFDGR* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0099 610 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Dod04g0099 610 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 24 610 IPR044812 GO:0019199|GO:0045087
Dod04g0099 610 ProSiteProfiles LysM domain profile. 151 197 IPR018392 -
Dod04g0099 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Dod04g0099 610 Gene3D Transferase(Phosphotransferase) domain 1 377 595 - -
Dod04g0099 610 Pfam LysM domain 153 198 IPR018392 -
Dod04g0099 610 SUPERFAMILY Protein kinase-like (PK-like) 288 582 IPR011009 -
Dod04g0099 610 Pfam Protein kinase domain 309 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0099 610 SMART LysM_2 152 198 IPR018392 -
Dod04g0099 610 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 24 610 - -
Dod04g0099 610 Gene3D Phosphorylase Kinase; domain 1 283 376 - -
Dod04g0099 610 SMART serkin_6 305 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0099 610 CDD LysM 151 197 IPR018392 -
Dod04g0099 610 ProSiteProfiles Protein kinase domain profile. 305 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0099 610 SUPERFAMILY LysM domain 151 198 IPR036779 -
Dod04g0099 610 Gene3D LysM domain 143 208 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0099 Dod-Chr4 1099768 1103791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0099 279 610 Receptor kinase-like Gene Family AT1G51940 51.479 9.12e-115 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dod04g0099 Pkinase 4.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0099 - - gmx:100791718 835.099