Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0090 ATGCCTCCCTTTCCCTTTGTTCTGCTTATCTTGCTCCTATGTTCCCTTTCAACTCGTACCCTCTCCGATCCGAGAGCCACAAGGGCAGCCATGGTGTGCACCAACAGAACTGCACCCATGTCTTCCCGTCAACTCTTCGTCTCAAACTTCCTTGCTGCCATGGACGCACTCACCCCTCTTGTCCAAACGCAAGGGTACGGTGCAGTCGTCAACGGCACAAAAAACTTCACCGTCTATGCCTTCGGTGAGTGCATGAAGGATCTCTCTCAGACGGATTGCAACATGTGCCTTGCACAGTGCAAGACTCAAGTCCTGAGCTGCTTGCCCTTTCAGAAAGGGACACGTGGCGGCAGGTTATTCTTTGATGGGTGCTACCTCAGGTACGATGACTACAACTTCTTCAATGAGAGTTTGAGTGATCAAGACCAAACTGTGTGTGGAGCCAGTGATTTTGGTGGTGGTGGTGAAAGGGGTGTTGTTTATAAGGCCAATGCTTTGGAGTTAGTTAAGAACTTGAGTGTTTTGGCACCAAAGAATGATGGGTTCTTTGTGGGATCTGTGAGTAAAAAGAATGTGACTGTTTATGGGTTGGCTCAGTGCTGGGAGCTAGTGAATGGAAGTGCATGCAGGAACTGTTTGGAAGATGCTGTAAATAGGATTGGTTCCTGTGCTCCAAAAGTAGAAGGGAGGGCTTTGAATGCTGGCTGTTACTTGAGGTATTCCACCAAAAAGTTCTATAACAATTCAACCAGTGATGCTTCCGCTTCAGGGAATCATGGACGTCGGAAGCTAGCTATTATTTTAGCTGCATCTTCTGCCACCGTGGCTCTTGTGCTGGTTGTTGCAAGTGTTGTTTTCTTTGGGAGGAAGAAGGTACTGAAGAAGAGAAGAGAAAGAAGACAGTTTGGTGCACTTTTGGACACAGTGAACAGGTCCAAGCTAAATATGTCATATGAAATTCTTGAAAGAGCAACAAATTACTTCAATGATACTAATAAGCTAGGACAAGGGGGATCAGGTTCAGTTTATAAAGGAGTTCTGCCAGATGGAAATGTTGTGGCCATAAAAAGGCTTAGCTTTAACACAACACAATGGGCAGATCATTTCTTCAATGAGGTTAATTTGATCAGCGGCATTCATCACAAAAATCTTTTAAAGCTTTTGGGGTGCAGCATTACTGGACCTGAAAGCCTACTTGTTTATGAATACGTGCCAAACCAGAGTCTCCATGATCACCTTTCTGGTTGTAACTATATATCTGAGATCTGA 1269 0.4507 MPPFPFVLLILLLCSLSTRTLSDPRATRAAMVCTNRTAPMSSRQLFVSNFLAAMDALTPLVQTQGYGAVVNGTKNFTVYAFGECMKDLSQTDCNMCLAQCKTQVLSCLPFQKGTRGGRLFFDGCYLRYDDYNFFNESLSDQDQTVCGASDFGGGGERGVVYKANALELVKNLSVLAPKNDGFFVGSVSKKNVTVYGLAQCWELVNGSACRNCLEDAVNRIGSCAPKVEGRALNAGCYLRYSTKKFYNNSTSDASASGNHGRRKLAIILAASSATVALVLVVASVVFFGRKKVLKKRRERRQFGALLDTVNRSKLNMSYEILERATNYFNDTNKLGQGGSGSVYKGVLPDGNVVAIKRLSFNTTQWADHFFNEVNLISGIHHKNLLKLLGCSITGPESLLVYEYVPNQSLHDHLSGCNYISEI* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0090 422 ProSiteProfiles Gnk2-homologous domain profile. 27 133 IPR002902 -
Dod04g0090 422 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Dod04g0090 422 Pfam Salt stress response/antifungal 40 131 IPR002902 -
Dod04g0090 422 Pfam Salt stress response/antifungal 159 242 IPR002902 -
Dod04g0090 422 Gene3D Phosphorylase Kinase; domain 1 289 403 - -
Dod04g0090 422 Pfam Protein kinase domain 329 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0090 422 SUPERFAMILY Protein kinase-like (PK-like) 307 418 IPR011009 -
Dod04g0090 422 ProSiteProfiles Gnk2-homologous domain profile. 139 245 IPR002902 -
Dod04g0090 422 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 17 417 - -
Dod04g0090 422 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 17 417 - -
Dod04g0090 422 Gene3D - 155 245 IPR038408 -
Dod04g0090 422 Gene3D - 26 133 IPR038408 -
Dod04g0090 422 ProSiteProfiles Protein kinase domain profile. 328 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0090 Dod-Chr4 1013022 1017120 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0090 20 413 Receptor kinase-like Gene Family AT1G70530 60.914 1.69e-176 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod04g0090 Pkinase 9.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0090 - - gmx:100787359 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0090 04 1013022 1017120 Dod04g0090 04 1013022 1017120 ECH