Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0089 ATGGAGAAATTACTAGTCCCTCTTGTCCATATTCAATGCCTTGTTTTCTTCCTTATTAAATCTCTATTGCTATTAGAAACAGTGGTAGCAGAACCAAGGGCAAGAACTGTCAACGTAACCTGTGGCCTTCAGCTAGAGCACAACACTACCATCTTTGTTCCAAATTTTGTTGCAACCATGGAGAAGATAAGTGAACAGATGCGCAACACTGGGTATGGCACAGCAGTTACAGGGAGAGGACCTGACACTAACTATGGCCTTGCACAGTGCTATGGAGATCTCTCATTACTTGACTGTGTTCTATGTTATGCCGAGGCACGCACGGTTCTTCCAAAGTGCTTCCCTTACAATGCTGGCCGCATATACCTTGATGGTTGCTTCATGAGGGCTGAAAACTATAGCTTCTATGAGGAGTATATAGGACCAGGAGATAGTGCTGTTTGTGGGAACACAAGAAGGAAGAACTCAAGTTTTCAAGCAGCTGCAAAGCAAGCAGTTTTGGGGGCAGTTCAAGATGCAACCAACAACAAAGGGTACGCTAAGGGGAAGGTTGATGTATCAGGAACAGGAAATGAGTCTGCTTATGTCCTTGCAAACTGTTGGAGGAGTTTGAACGCAAGCTCTTGCAAAGCTTGCCTTGAGAATGCATCTTCTTCTGTGTTGGGATGCTTGCCTTGGTTATTATTACCTCGGTTGTCATTCTGCTTTATAGGTTCAAATGATGCGGAGAAGTTAGCTAAGACCCTTCAGCACAATAGCTTGAACTTCAAGTACTCTACACTGGTGAAGGCTACTGGATCATTTGATGAAGCTAACAAGCTCGGACAAGGAGGATTCGGAATGGTTTATAGAGGAGTGCTTCCTGATGGAAGAGAGATTGCTATTAAGAGGTTACACTTCAACAACAGACATAGAGCAGCAGATTTCTACAATGAAGTCAACATAATTAGCAGTGTGGAACACAAGAATCTAGTCAGACTGTTAGGATGCAGTTGTTCAGGATCTGAAAGCTTGCTTGTATACGAATTTCTACCCAACAAAAGTCTCGATCGCTTCATTTTTGATGGAAACAAGGGTAGAGAACTAAACTGGGAGAAGAGATACGACTGGTCCTGCAGGGGTTATATGGCACCAGAATACCTAGCTCATGGCCAGTTAACAGATAAGGCAGATGTATATAGTTTTGGAGTGTTACTGCTAGAAATAGTTACTGGGAGACAGAACAACAGAAGCAAAACATCAGAATACTCAGAGAGCTTAGTTACATTGACATGGAGGCATTTTCAGTCAGGGACTGCAGAACAATTACTTGATCCAAATCTAGCGCCAGATGCCAACCACAGTAGCAATGCTAAGAATGAGATATTAAGAGTGACGCATGTGGGACTTCTCTGCACCCAAGAGAACCTTTCCTTAAGGCCTACAATGTCAAAGGCACTACAAATGCTAACAAAGAAGGAGGAGCACCTTGCAAATCCCTCTAATCCACCCTTCATGGATGAAAGTACAATGGAACTCCAAGACAATGGAGATGACCCATGTTGCCCTCTAAATGCAGCATGCTCAGCGGCTACTATGTCTGATAGTTCCTTTCATGCAAGGTGA 1605 0.4349 MEKLLVPLVHIQCLVFFLIKSLLLLETVVAEPRARTVNVTCGLQLEHNTTIFVPNFVATMEKISEQMRNTGYGTAVTGRGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPKCFPYNAGRIYLDGCFMRAENYSFYEEYIGPGDSAVCGNTRRKNSSFQAAAKQAVLGAVQDATNNKGYAKGKVDVSGTGNESAYVLANCWRSLNASSCKACLENASSSVLGCLPWLLLPRLSFCFIGSNDAEKLAKTLQHNSLNFKYSTLVKATGSFDEANKLGQGGFGMVYRGVLPDGREIAIKRLHFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGSESLLVYEFLPNKSLDRFIFDGNKGRELNWEKRYDWSCRGYMAPEYLAHGQLTDKADVYSFGVLLLEIVTGRQNNRSKTSEYSESLVTLTWRHFQSGTAEQLLDPNLAPDANHSSNAKNEILRVTHVGLLCTQENLSLRPTMSKALQMLTKKEEHLANPSNPPFMDESTMELQDNGDDPCCPLNAACSAATMSDSSFHAR* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0089 534 Gene3D - 35 135 IPR038408 -
Dod04g0089 534 Gene3D - 145 231 IPR038408 -
Dod04g0089 534 ProSiteProfiles Gnk2-homologous domain profile. 34 135 IPR002902 -
Dod04g0089 534 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 11 226 - -
Dod04g0089 534 ProSiteProfiles Protein kinase domain profile. 268 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0089 534 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 11 226 - -
Dod04g0089 534 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 373 515 - -
Dod04g0089 534 SUPERFAMILY Protein kinase-like (PK-like) 252 502 IPR011009 -
Dod04g0089 534 Gene3D Transferase(Phosphotransferase) domain 1 365 499 - -
Dod04g0089 534 Gene3D Phosphorylase Kinase; domain 1 237 343 - -
Dod04g0089 534 Pfam Salt stress response/antifungal 151 223 IPR002902 -
Dod04g0089 534 Pfam Salt stress response/antifungal 52 133 IPR002902 -
Dod04g0089 534 ProSiteProfiles Gnk2-homologous domain profile. 140 249 IPR002902 -
Dod04g0089 534 ProSitePatterns Protein kinases ATP-binding region signature. 274 296 IPR017441 GO:0005524
Dod04g0089 534 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 238 369 - -
Dod04g0089 534 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 373 515 - -
Dod04g0089 534 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 238 369 - -
Dod04g0089 534 Pfam Protein tyrosine and serine/threonine kinase 271 356 IPR001245 GO:0004672|GO:0006468
Dod04g0089 534 Pfam Protein tyrosine and serine/threonine kinase 374 428 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0089 Dod-Chr4 1006750 1009661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0089 374 534 Receptor kinase-like Gene Family AT1G70520 60.976 6.06e-55 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod04g0089 PK_Tyr_Ser-Thr 3.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0089 - - csin:114313632 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0089 04 1006750 1009661 Dod04g0089 04 1006750 1009661 ECH