Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0062 ATGGCTCTCAAGAACAATATTACCGAGGATGATGATGATTCTTCTTCTTCTCAATCAGATTCCGATGAGTCTTCTTCTTATTCTCAATCAGATTCAGATGAGTCTTCTTCTTCTTCATCATCATCACCACCACCACCACCCTCTTCTTCACAATATAAAACAAACTCGGAAACGACGACGAAGACCCGTTCGGATAAGGACCCTCCTTCTGAAAAGGATCCAGCTCCATCACCAAAGCCTCCAGCTGAATCCGATTCCCCCAAAGGTGCTCCGTCGGAGGAGTCGCCTCCTCCGCCCAAGAGTCCACCGCCGTCTAAAGCCGTGGCTCCTCCGGTGCCACCACCACCGTCACCACCTCCTCGAACCCAGCCACCACCATCTCCGCCGTTACCATCTCCGCCGCTACCATCTCCACCGCCACTGTCTTGGCCACCGCCACTGGTGCAAAATAGCAGCAACCCTTCTTCCTCTTCTCCTCCTCCATATAGAGGGTCACCTCCACCACAGTTTCAAGCCCCACCACGGTCTTCTTCTTCTTCATCTTCACCTTCACCTTTACCTTCACGCGGTGGACCTTCTTCTTCCAATGATTCAACCCCCTCGGCGATTCCACCACCGGCATCTGGTCAAGCCATGCGCGGTGGTAGCAGTGGTGGCGGTGGCTCTTCCTCTTCCTCCCCTGCAGGCTCTTCTCCCAGCTCATCAGGCGGTGACAACGAAGGAAAATACGTAGGGTATACCCTCGGCGCGGTTTTCATCGTTGGCTTATTAGTTGCTGTAGCTATTCTCGCATTTAGGAAAAGGAAATCAAAAGGGGATGCCAATGCTGCACCCTATATGCGTACCCCTCATCTTAAATTTCACATGAAGCCGGGTGTTGATGGACTTTACTATGGACAGCAGCCTGGTGGTTTTGAGAATGGTCCACAATCTCCCTTTGGAAGCGGGAAGAATCTTGGACGAAACATGAGTCATGGAGGAGCAGCTTTAGACTCGGCGCAACCCATGAGTGCTCAGATAGCCTTTACCTATGACATGGTCATGGAGATGACTGATTCATTCTCTAGTCAGAATGTTATAGGTGAAGGGGGATTTGGGTGTGTTTACAAGGGTTCTCTGCCGGATAATGGAAAGGCGGTCGCGGTTAAGCAGCTTAAGGCAGGCAGTCTCCAGGGAGAAAGGGAATTCAGGGCTGAAGTGGAGATTATCAGCCGTGTCCATCATCGGCATTTGGTATCGTTGGTTGGTTATTGCATAGCTGAGCAGCAAAGAATGCTTATCTATGAGTATGTTCCTAATGGGACACTCCATCATCACTTGCATGGAAGTGGAATGCCAGTGTTGGAATGGGACAAGAGGCTGAAGATAGCAATTGGCGCTGCAAAGGGCTTGGCATATCTGCACGAGGACTGTAACCAAAAGATTATTCACAGAGATATTAAGTCAGCAAACATACTTTTGGATGACGCTTTTGAGGCTCAGGTTGCAGACTTTGGACTTGCCAGGCTAACTGATACTGCTAATACACATGTATCAACTAGGGTCATGGGGACCTTTGGGTACATGGCTCCAGAGTATGCGACCAGTGGAAAATTAACGGATAGATCGGATGTTTTCTCATTTGGGGTTGTCCTCCTTGAGCTTTTGACTGGAAGGAAACCGGTTGATGAAACTCAGCCTCTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTTCTTCGTGCGATTGAGACACGCGAGTCTAGGGCGCTAATAGACCCGAGGCTTGAAAATCACTTTGTGGAGAGTGAGATGTTCAGAATGATTGAGGCGGCTGCAGCTTGTGTTCGCCACTCTGCTCCTAAACGGCCTCGTATGGTTCAGGTGGTAAGAGCCTTAGATTGTGGAGATGAAATATCTGATCTATCTAATGGGGTAAAATATGGTCAAAGCACTGTTTACGATTCCGGCCAGTATGATAAAGACATTAGGCTATTCAGGAGGATGGCGGATGGCAGCTTTGTTGATTCTGATCTTGATATGTACAGTAGAGAATACGGTTCAGAGTCTGGATCCCAACATGCATGGATGCCAAGTGGTTCTAGTGGCGAGTCAGAATCCAGAGCTTTCAACAAGCATAAGAGCAGTACTGGATGA 2142 0.4921 MALKNNITEDDDDSSSSQSDSDESSSYSQSDSDESSSSSSSSPPPPPSSSQYKTNSETTTKTRSDKDPPSEKDPAPSPKPPAESDSPKGAPSEESPPPPKSPPPSKAVAPPVPPPPSPPPRTQPPPSPPLPSPPLPSPPPLSWPPPLVQNSSNPSSSSPPPYRGSPPPQFQAPPRSSSSSSSPSPLPSRGGPSSSNDSTPSAIPPPASGQAMRGGSSGGGGSSSSSPAGSSPSSSGGDNEGKYVGYTLGAVFIVGLLVAVAILAFRKRKSKGDANAAPYMRTPHLKFHMKPGVDGLYYGQQPGGFENGPQSPFGSGKNLGRNMSHGGAALDSAQPMSAQIAFTYDMVMEMTDSFSSQNVIGEGGFGCVYKGSLPDNGKAVAVKQLKAGSLQGEREFRAEVEIISRVHHRHLVSLVGYCIAEQQRMLIYEYVPNGTLHHHLHGSGMPVLEWDKRLKIAIGAAKGLAYLHEDCNQKIIHRDIKSANILLDDAFEAQVADFGLARLTDTANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELLTGRKPVDETQPLGDESLVEWARPLLLRAIETRESRALIDPRLENHFVESEMFRMIEAAAACVRHSAPKRPRMVQVVRALDCGDEISDLSNGVKYGQSTVYDSGQYDKDIRLFRRMADGSFVDSDLDMYSREYGSESGSQHAWMPSGSSGESESRAFNKHKSSTG* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0062 713 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 75 688 - -
Dod04g0062 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Dod04g0062 713 SUPERFAMILY Protein kinase-like (PK-like) 335 628 IPR011009 -
Dod04g0062 713 Gene3D Phosphorylase Kinase; domain 1 321 430 - -
Dod04g0062 713 MobiDBLite consensus disorder prediction 1 238 - -
Dod04g0062 713 MobiDBLite consensus disorder prediction 174 205 - -
Dod04g0062 713 ProSiteProfiles Protein kinase domain profile. 354 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0062 713 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 75 688 - -
Dod04g0062 713 MobiDBLite consensus disorder prediction 681 713 - -
Dod04g0062 713 MobiDBLite consensus disorder prediction 19 39 - -
Dod04g0062 713 MobiDBLite consensus disorder prediction 680 713 - -
Dod04g0062 713 SMART serkin_6 354 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0062 713 MobiDBLite consensus disorder prediction 59 73 - -
Dod04g0062 713 Pfam Protein tyrosine and serine/threonine kinase 357 627 IPR001245 GO:0004672|GO:0006468
Dod04g0062 713 MobiDBLite consensus disorder prediction 159 173 - -
Dod04g0062 713 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Dod04g0062 713 MobiDBLite consensus disorder prediction 74 147 - -
Dod04g0062 713 Gene3D Transferase(Phosphotransferase) domain 1 431 642 - -
Dod04g0062 713 PRINTS Proline rich extensin signature 101 118 - -
Dod04g0062 713 PRINTS Proline rich extensin signature 120 145 - -
Dod04g0062 713 PRINTS Proline rich extensin signature 34 46 - -
Dod04g0062 713 PRINTS Proline rich extensin signature 83 99 - -
Dod04g0062 713 PRINTS Proline rich extensin signature 60 81 - -
Dod04g0062 713 CDD STKc_IRAK 360 629 - -
Dod04g0062 713 MobiDBLite consensus disorder prediction 215 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0062 Dod-Chr4 729227 733766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0062 171 681 Trihelix Transcription Factor Family AT1G70460 59.273 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dod04g0062 PK_Tyr_Ser-Thr 5.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0062 - - lang:109330554 704.131