Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0049 ATGATGTTTCAAGGGAAAGGGTCCTTGGTATTAGTATTAATACTCCTTTTGTTCAACACCCTTCATCTTGTGTGTTCTCAAAATCCTGCTAATGATTGTGCACTAGATATTCAATTTTCTTCAGCATTGAATATCTCAAATTGTGAACAGCAGCACAATTGGGGAGGATTTATCAACAGCTGTTGTCGACTATATTTTGATGATTACCTATATGCCTTGGGGCTGCATGCCAACCAAACTGGAAAAGTATTCTTGAATTCCTCAGAGGAACAAAAGTGCTTAGCAATAATGGATCAATTGTCTCAGAAAAATTTTACAGGCTGTGGGATAGAGAAGTTAACCAGTGGAGCTGGTGGTTGCTCTGATTACACTGTTATGGATGTTGTCAACAAGCTTGGAGACAAATTAAGGAGACTAGATGAAGATTGTATTCATTTAAGTATGAATGGCAGGCCAAATGAAACTTGCACTGCATGTTTGAAAGCATGGGAGGATGTTATTGTAACATCAGACAATAATACAAGGGAATCAGAATCAGCAAATACCATCAGTGCTGATCTTTGCAGGTTTGCAGTACTAGTCTCACTGACAAGCATCAGACTTTATGCTCGAGAATCACTTCATGCAGTTTATGAATGCCTAGGAGGAAACAGCCTCCCTGCAGATAGGCAAGAAATCCAGGCTAAGGGCAATGCTAATATCAGGCCAGGTCTCAAGATCCTAGCCTTTGGCTTAACCGGAGTCACAGTAGTAGTGCTTCTTGCCGCACTTGCATTGTTTATTAAAAGAATTAGAGGTGCTTCAAGTCCAACCATAAAAGTTGAGTCTGAGGATTCAACATCGCTTAAGATATCTCTGAAGGATGTTTATGTAGCAACTAACAATCTCAGCGCAGCAAATTTCATAGGCCAAGGCATAGCTGGTAAAGTGTACAAAGGTATACTCTCCAATGGTTATTATGTTGCAGTGAAGCATATCACCAATGAATGTTACATGGAGACATTTATTAGAGAAGTGAGAAGCCTATCCCATATTAGACATCCAAACCTAGTAGCTTTGCTCGGATACTGTGAAAATGAAGCTGAATGCTTCCTAGTGTATGAACTATGCCACAATGGAAGCCTCTCAGATTGGCTATTTGGCAATGATAAAGTTTTTTCATGGATTCAAAGACTAGAGATTGCTGTTGATAGTGCAAGAGGCCTGGAGTTTCTCCACACCTATCCAGGTGGCTGCATTGTTCACCGTGATATAAAGCCATCAAACATTCTCATTAATGCCAAATTCCAAGCAAAGCTTTCAGACTTTGGGTTGTCCAAGGTTATGGACGTGGGCCAATCCTATGCGAGCTCTGAAGTGAGAGGAACATTTGGCTATATTGATCCTGAATATCGGACAAACCACCATGTGAATGCCTGTGGAGATGTCTACAGCTTTGGAATAGTTTTATTGCAACTTCTATCAGGACAAAGGGTCATTGACATCAACTTCCAGAGACCAATGCCCCTAAGTAAAATGGCCAGATATTTTGCTAGAGGTGGTGATATTTCACAATTCGCTGACCTAAAACTCAAAGGGGAGTATTCTGTAGAAGCATTTGACATCACACTGAAGCTAGCTTTGTCTTGCATAGGGCTCAAGGAGCAAAGGCCCTCTATAGAGCAAGTGTTATATACCCTTGAAAAGGCACTAGATATCTCAACATAA 1707 0.4066 MMFQGKGSLVLVLILLLFNTLHLVCSQNPANDCALDIQFSSALNISNCEQQHNWGGFINSCCRLYFDDYLYALGLHANQTGKVFLNSSEEQKCLAIMDQLSQKNFTGCGIEKLTSGAGGCSDYTVMDVVNKLGDKLRRLDEDCIHLSMNGRPNETCTACLKAWEDVIVTSDNNTRESESANTISADLCRFAVLVSLTSIRLYARESLHAVYECLGGNSLPADRQEIQAKGNANIRPGLKILAFGLTGVTVVVLLAALALFIKRIRGASSPTIKVESEDSTSLKISLKDVYVATNNLSAANFIGQGIAGKVYKGILSNGYYVAVKHITNECYMETFIREVRSLSHIRHPNLVALLGYCENEAECFLVYELCHNGSLSDWLFGNDKVFSWIQRLEIAVDSARGLEFLHTYPGGCIVHRDIKPSNILINAKFQAKLSDFGLSKVMDVGQSYASSEVRGTFGYIDPEYRTNHHVNACGDVYSFGIVLLQLLSGQRVIDINFQRPMPLSKMARYFARGGDISQFADLKLKGEYSVEAFDITLKLALSCIGLKEQRPSIEQVLYTLEKALDIST* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0049 568 SUPERFAMILY Protein kinase-like (PK-like) 277 560 IPR011009 -
Dod04g0049 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Dod04g0049 568 Gene3D Phosphorylase Kinase; domain 1 259 369 - -
Dod04g0049 568 PANTHER - 31 568 - -
Dod04g0049 568 SMART serkin_6 296 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0049 568 Pfam Protein kinase domain 300 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0049 568 Pfam SPARK 28 178 IPR043891 -
Dod04g0049 568 Gene3D Transferase(Phosphotransferase) domain 1 370 567 - -
Dod04g0049 568 PANTHER OS01G0750732 PROTEIN 31 568 - -
Dod04g0049 568 ProSiteProfiles Protein kinase domain profile. 296 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0049 Dod-Chr4 583452 586689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0049 279 566 Receptor kinase-like Gene Family AT5G59700 39.865 1.38e-55 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Dod04g0049 Pkinase 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0049 - - gsj:114395768 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0049 04 583452 586689 Dod04g0049 04 583452 586689 ECH