Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0047 ATGATCCGAACATCAAACGGGTATGGTCGCCGGATTCTGAATTTTCCGGCGGTCCACCCCTCCGATGACGTCTCTCTCCCCACCCTTCTCTCTTCTCTGATCACTCTCTCTCACAGCATGTGCACCTTCACCTCTAAATGCAGGTCCTTATTCCCATGCAACAAGCGACACGCCACAACATGCGTTCGATTCGTCGAGGTTCTTCTCCGTTTCTTCGGGGACATCCGGGATCAACTCTGGAACCTTCCGGTTTCGGTTGTTCTCCCCTTGCTGGAGCTCCACTTCACCTTCCAGAAGCTCCTCTTCCTCCTAGAAGATTCCTCCCGCGAGGGTGCCAGGCTCTGGATGCTTATGGAGTCGGGTCGGGTCGCCACAATGTTCCGGGTCTTATCCCCGTCGGTGGCCACGGCTCTGGACGTGTTTCCTTTGAGTTCTGTTGATGGGGTTTCGGTGGAAGCTAAGGGGCAGGTGGAGCTTGTGATGAGGCAAGCAAGGAAGGCCAGGTTTGAGGTTGAGGTTGAAGATAAGAGAGCCATGATGCGTGTTGTGTCGATTTTGAACAAGTTTGAGAAGAAGATTGTTCCGATCAATGAGGGTGATCTGAGATGGGTTCTTGAGTACATAGGGGTTAGAAGGTGGAGTTTTTGGGGGGTGAGATTGAGGCTGAGATGTTGA 675 0.5274 MIRTSNGYGRRILNFPAVHPSDDVSLPTLLSSLITLSHSMCTFTSKCRSLFPCNKRHATTCVRFVEVLLRFFGDIRDQLWNLPVSVVLPLLELHFTFQKLLFLLEDSSREGARLWMLMESGRVATMFRVLSPSVATALDVFPLSSVDGVSVEAKGQVELVMRQARKARFEVEVEDKRAMMRVVSILNKFEKKIVPINEGDLRWVLEYIGVRRWSFWGVRLRLRC* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0047 224 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 18 4 214 - -
Dod04g0047 224 PANTHER U BOX DOMAIN-CONTAINING 4 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0047 Dod-Chr4 581094 581768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0047 1 213 U-box Gene Family AT1G60190 44.700 3.79e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0047 - - vra:106779024 214.542