Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0045 ATGGGTTCTTCAATGAGGATCTCGAGGCTGCTCTCTCGCTCTTTCTCTTCTGCTTCTTCATCTTTGTGCTCTCGAGGTGGGAAGGGTTACCTGGCTGTTGCAGGACTGAGCAAATATAGCACTGCTGCTGCCATTGAAGAAGAACCAATTAAACCAGCGGTACAACTAGAGCACACCCAGCTCTTAATTGATGGAAAATTCGTTGATGCTCTTTCTGGTAAAACTTTTCCAACGTTGGATCCCAGGACTGGGGAAGTGATAGCTCATGTTGCTGAGGGTCACTCCGAAGATGTTGATCGAGCAGTTGCAGCTGCTAGAAAAGCATTTGATCAAGGACCATGGCCTAAGATGACTGCCTATGAGAGGCAAAGGATACTGCTGCGTGCTGCTGATCTGCTTGAGAAGCACAATGATGAGCTTGCAGCACTCGAGTCTTGGGATAATGGGAAGCCATATGAACAGTCTGCTCAGATTGAGGTTCCAATGCTGGTTCGCCTGTTTAGGTACTATGCTGGTTGGGCAGATAAGATCCATGGTCTCACGGTTCCAGCTGATGGGCCACATCATGTGCAAACACTGCATGAACCTATCGGTGTTGCTGGTCAGATCATTCCCTGGAACTTCCCTCTTCTCATGTTTGCTTGGAAGGTTGGACCAGCATTGGCCTGTGGCAACACGATTGTTCTCAAAACAGCTGAGCAGACACCACTGTCTGCTTTATATGCAGCAAAACTATTTCATGAGGCTGGACTTCCTCCTGGTGTTTTGAATGTAGTTTCGGGCTTTGGTCCAACAGCTGGTGCTGCTCTTGCCAGTCACATGGATGTGGATAAGCTTGCTTTTACTGGTTCAACTGATACCGGAAAAGTTGTCCTTGAACTAGCGGCTAAAAGCAATCTTAAGCCTGTAACTTTGGAGCTTGGTGGAAAATCCCCCTTCATTGTATGTGAAGATGCTGATGTAGACCAGGCTGTGGAGCTAGCACACTTTGCCTTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGGTCTCGAACATTTGTACATGAGCGTATATATGATGAGTTTGTTGAGAAGGCAAAGGCTCGTGCTTTGAAGCGTGTTGTTGGCGATCCATTCAAGGGGGGAATAGAGCAAGGCCCTCAGGTTGATTCAGAACAATTTGAGAAGATACTCAGGTATATCAGATCTGGTGTTCAAAGTGGAGCTACACTTGAAACCGGGGGAGATAGACTTGGCAACAAGGGCTTCTATATTCAGCCTACTGTCTTCTCAAATGTTCAGGATGGCATGTTGATTGCAAAGGAAGAGATATTTGGCCCAGTGCAATCCATATTGAAATTCGAGGACCTTGGTGAGGTAGTTCAAAGAGCAAACAACACACGATATGGGCTTGCAGCGGGGGTGTTTACAAAGAACATAGACACTGCCAATACATTGACCAGAGCATTGAGGGTTGGAACAGTGTGGGTGAACTGCTTTGACACATTTGATGCTGCAATCCCATTTGGTGGGTACAAGATGAGTGGGCAGGGAAGAGAAAAGGGAGAATACAGCCTCAAGAATTACTTGCAAGTCAAGGCTGTTGTTACTCCCTTGAAGAACCCTGCGTGGCTTTAG 1620 0.4679 MGSSMRISRLLSRSFSSASSSLCSRGGKGYLAVAGLSKYSTAAAIEEEPIKPAVQLEHTQLLIDGKFVDALSGKTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDQGPWPKMTAYERQRILLRAADLLEKHNDELAALESWDNGKPYEQSAQIEVPMLVRLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERIYDEFVEKAKARALKRVVGDPFKGGIEQGPQVDSEQFEKILRYIRSGVQSGATLETGGDRLGNKGFYIQPTVFSNVQDGMLIAKEEIFGPVQSILKFEDLGEVVQRANNTRYGLAAGVFTKNIDTANTLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0045 539 CDD ALDH_F2BC 57 531 - -
Dod04g0045 539 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 26 539 - -
Dod04g0045 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 333 344 IPR016160 GO:0016491
Dod04g0045 539 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 26 539 - -
Dod04g0045 539 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 305 312 IPR029510 GO:0016491
Dod04g0045 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 311 500 IPR016163 GO:0016620
Dod04g0045 539 Pfam Aldehyde dehydrogenase family 69 529 IPR015590 GO:0016491
Dod04g0045 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 73 529 IPR016162 GO:0016491
Dod04g0045 539 SUPERFAMILY ALDH-like 55 533 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0045 Dod-Chr4 557231 561283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0045 3 539 Aldehyde Dehydrogenase Gene Family AT3G48000 76.723 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0045 K00128 - gmx:100777399 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0045 04 557231 561283 Dod04g0045 04 557231 561283 ECH
Dod04g0045 04 557231 561283 Dod05g1635 05 41507756 41519440 ECH