Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0042 ATGAAGGTAGATAGGATTGAAGAAAGCAGTGTGAGGTTGTTGGGTAGGAGCAGCAGCAGTGGTGGGAGCAGTGAGTCAAGGTGGGTTGATGGCAGTGAAGTTAACTGGGATGAGGCTCCTCCATGGTCCAAGCATGGTGACAAAGACGGCAGAGAAGGGTATGGAACACTCAGGAGGAGGCTCATCAAGAAGCCCAAGAGGGTTGATTCCTTTGATGTTGAAGCCATGGAGATTGCTGGAGCTCATGGTCAACACACCAAGGATATTTCCCTTTGGCCCACTCTGGCATTAGCATTTAAGACTCTTGGTGTGGTATATGGTGATATGGGAACAAGTCCTCTATATGTTTTTGCTGATGTCTTCAGCAAGGTTCCAATTGAATCAGAGGTTGATATCTTGGGGGCTTTATCATTAATAATGTACACAATAGCACTTATTCCATTAGCAAAGTATGTCTTTATAGTGCTCAAAGCAAATGATAATGGAGAAGGAGGAACATTTGCGCTATACTCGCTGATTTGCAGGTATGCAAATGTGAATCTGCTTCCAAATCGTCAACAAGCTGATGAACACATCTCTAGTTTTAAGCTCAAACTCCCTACTCCAGAGCTGGAAAGGGCTTTAAAAATAAAGGAGACCTTGGAAAGGATGACAACTTTGAAAAATATTTTGTTGGTGTTGGTTCTTCTAGGAACTTCTATGATCATTGGAGATGGTATTCTAACCCCAGCAATCTCAGTGATGTCTGCCATCAGTGGTCTGCAGGGTCAAGTAAATGGATTTGGTACAGGCGCACTGGTTGGTGTTTCAATTATAGTCCTGGTAGCTTTGTTCAGCATACAACGGTTTGGTACCGGTAAAGTGGGTTTCATGTTTTCCCCAGTACTTGCTTTATGGTTCTTCTCTCTGGGTTCTATTGGAATCTACAATATGCTCAAGTATGATATTACTGTTCTGAGAGCATTCAATCCAGCTTATATCTATTATTTCTTCAAGAATAATGGCACAGGTGCATGGTCAGCTCTTGGTGGTTGTGTTCTCTGTATTACAGGTGCAGAAGCAATGTTTGCAGATCTTGGTCATTTTTCTGTACCAGCAATACAGATTGCCTTCACTTGTGTGGTATTTCCTTGTCTCCTCCTTGCTTACATGGGCCAAGCTGCTTATTTGATGAAGAACCCAGCTTCTTATTCAAGGGTATTCTACAACTCTGTTCCAGAAAGTCTCTTCTGGCCAGTGTTTGTTATCGCTACATTTGCTGCTATGATTGCCAGTCAAGCTATGATATCTGCTACATTTTCATGCGTAAAGCAATCTATGGCTTTAGGATGCTTCCCCAGGCTCAAGATAATTCACACCTCAAGAAGGTTCATGGGTCAAATTTACATCCCTGTAATGAATTGGTTTCTGATGATCATGTGCATAGTTGTCGTTTCCATCTTCCAAAGCACTACGGATATCGCAAATGCATATGGCATTGCTGAAGTTGGTGTAATGATGGTTAGCACCACGTTGGTGACACTTGTAATGCTTTTAATTTGGCAGACTAACTTGTTTTTGGCATTGTGTTTCCCATTGGTATTTGGTTCAGTGGAGCTGATTTACATGTCTGCTGTCCTATCAAAACTCTTTGAAGGTGGCTGGCTTCCACTTGCCTTTGCTACCCTTTTCCTGTCTGTGATGTACACCTGGAACTATGGGAGTGTGTTGAAGTACAGGAGCGAAGTTAGAGAGAAAGTTTCAATGGACTTGATGCTTGATCTCGGCTCCGATCTTGGAACAGTAAGAGTGCCAGGAATAGGATTGCTATATAACGAGCTTGTCCAGGGCATTCCTTCCATTTTTGTGCAGTTCCTGCTGAGCCTTCCAGCTCTTCACTCTACTATAGTTTTTGTCTGCATTAAATATGTCCCAATCCCAGTGGTTCCTCAAGAGGAAAGATTTCTGTTTCGAAGAGTTTGCCCGAAAGATTACCATATGTTCCGCTGTGTTGCCAGGTATGGTTACAAAGATATAAGGAAAGAAGATCACCATGCATTTGAGCAACTTCTCATTGAAAGTCTTGAGAAATTCTTGAGAACAGAAGCTCAAGAGACTGCCTTGGAGTTAGAGGGCAACTTAACCGAAGACACGGATAATGTGTCAGTGAAATCAAGGGACTCTGATCATCCTGCTGGTGATGGGGCTGAGGAGCTGAGGATTCCACTGATGCATGGCCAAAATTTGGAAAAAACAGGAGCTTCTACATCTCAGGAAGCTGCATCAACATTACCATCAAGTTACATGTCATCAGATGAAGATCCTAGCCTTGAGTATGAGCTTGCAGCCCTTAGAGAAGCAATGGAATCAGGATGCACCTATTTACTTGGACATGGGGATGTGAGGGCCAAGAAGAACTCTTTCTTCTTCAAGAAATTGGTGATAAATTATTTCTATGCATTTCTTAGGAAGAACTGCAGAGGTGGTCCTGCAAACATGAGAGTGCCTCACACCAATATCATGCAAGTGGGGATGACATATATGGTCTGA 2529 0.4282 MKVDRIEESSVRLLGRSSSSGGSSESRWVDGSEVNWDEAPPWSKHGDKDGREGYGTLRRRLIKKPKRVDSFDVEAMEIAGAHGQHTKDISLWPTLALAFKTLGVVYGDMGTSPLYVFADVFSKVPIESEVDILGALSLIMYTIALIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNLLPNRQQADEHISSFKLKLPTPELERALKIKETLERMTTLKNILLVLVLLGTSMIIGDGILTPAISVMSAISGLQGQVNGFGTGALVGVSIIVLVALFSIQRFGTGKVGFMFSPVLALWFFSLGSIGIYNMLKYDITVLRAFNPAYIYYFFKNNGTGAWSALGGCVLCITGAEAMFADLGHFSVPAIQIAFTCVVFPCLLLAYMGQAAYLMKNPASYSRVFYNSVPESLFWPVFVIATFAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSRRFMGQIYIPVMNWFLMIMCIVVVSIFQSTTDIANAYGIAEVGVMMVSTTLVTLVMLLIWQTNLFLALCFPLVFGSVELIYMSAVLSKLFEGGWLPLAFATLFLSVMYTWNYGSVLKYRSEVREKVSMDLMLDLGSDLGTVRVPGIGLLYNELVQGIPSIFVQFLLSLPALHSTIVFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDIRKEDHHAFEQLLIESLEKFLRTEAQETALELEGNLTEDTDNVSVKSRDSDHPAGDGAEELRIPLMHGQNLEKTGASTSQEAASTLPSSYMSSDEDPSLEYELAALREAMESGCTYLLGHGDVRAKKNSFFFKKLVINYFYAFLRKNCRGGPANMRVPHTNIMQVGMTYMV* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0042 842 MobiDBLite consensus disorder prediction 1 51 - -
Dod04g0042 842 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 7 842 IPR003855 GO:0015079|GO:0016020|GO:0071805
Dod04g0042 842 MobiDBLite consensus disorder prediction 713 729 - -
Dod04g0042 842 Pfam K+ potassium transporter 98 671 IPR003855 GO:0015079|GO:0016020|GO:0071805
Dod04g0042 842 MobiDBLite consensus disorder prediction 12 30 - -
Dod04g0042 842 MobiDBLite consensus disorder prediction 745 766 - -
Dod04g0042 842 MobiDBLite consensus disorder prediction 702 729 - -
Dod04g0042 842 PANTHER POTASSIUM TRANSPORTER 12-RELATED 7 842 - -
Dod04g0042 842 TIGRFAM kup: potassium uptake protein 97 842 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0042 Dod-Chr4 526393 534652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0042 3 842 Inorganic Solute Cotransporters AT1G60160 74.468 0.0 1261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0042 K03549 - gmx:100814419 1410.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0042 04 526393 534652 Dod04g0042 04 526393 534652 ECH