Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0025 ATGCCATTTGGTTTGGTCTCAGCCTGGAACAAGCGCAGGAGAAGCAAGTCTCAAGATCATTCAGACCCTTGGATTTATAAGCCTGCAGAGTTTTGGCAACTTGAAGATCAAGCACCGCAGCCTACAAAAATGAGGCATGGATCATATGTTTTCACACTCAAGCAGATGGAAGAGGCAACATGTTCATTCAGTGATGATAATCTGCTTGGTAAAGGAGGATTTGGCAAGGTCTACAGGGGCACTTTGCGGTCAGGAGAGATTGTAGCAATCAAGAAAATGGAGCTGCCAGCAATCAGAGAAGCAGAAGGGGAGCGTGAATTTCGTGTGGAAGTTGACATATTGAGCAGACTCGACCACCCAAATCTTGTTTCTTTGATTGGCTACTGTGCTGATGGGAAGCATAGATTCCTTGTATACGAATATATGCATAATGGGAACCTGCAAGACCATTTGATTGGTATCGGGGAAAAGAAAATGGATTGGCCTCTAAGAGTCAAAGTGGCATTGGGAGCTGCAAAAGGACTTGCTTATCTCCATTCAAGCTCATGTGTTGGAATTCCCATTGCTCATAGAGATTTCAAATCCACCAATGTTCTTCTAAGTGCCAATTTTGAAGCAAAGATATCTGATTTTGGGCTTGCCAAGCTAATGCCTGAAGGACACGAGACACATGTGACAGCCAGAGTACTTGGTACCTTCGGCTATTTTGATCCTGAGTATACATCGACTGGAAAACTGACTCTACACAGTGATGTTTATGCTTTTGGTGTTGTTCTTTTGGAGCTTTTGACAGGACGTCGAGCTTTAGATCTAAACCAAGGTCCAAATGATCAAAACCTTGTACTGCAGGTGAGGCACCAATTAAATGACCGGAAGAAGCTACGTAAGGTGATAGATCCAGACATGGCTAGAAATTCTTACACCTTCGAGTCTATATTCATGTTTGCCAACTTAGCATCCCGATGTGTCCGTGCTGAGAGTAATGAGAGACCTTCCATGGTAGAATGTGTAAGAGAACTCCAAATGATTATCTATACAAATTCAAAAGGCTTGGGAATGGTTATGCATAGCTTGAGAATGATGTAG 1086 0.43 MPFGLVSAWNKRRRSKSQDHSDPWIYKPAEFWQLEDQAPQPTKMRHGSYVFTLKQMEEATCSFSDDNLLGKGGFGKVYRGTLRSGEIVAIKKMELPAIREAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLIGIGEKKMDWPLRVKVALGAAKGLAYLHSSSCVGIPIAHRDFKSTNVLLSANFEAKISDFGLAKLMPEGHETHVTARVLGTFGYFDPEYTSTGKLTLHSDVYAFGVVLLELLTGRRALDLNQGPNDQNLVLQVRHQLNDRKKLRKVIDPDMARNSYTFESIFMFANLASRCVRAESNERPSMVECVRELQMIIYTNSKGLGMVMHSLRMM* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0025 361 CDD STKc_IRAK 69 341 - -
Dod04g0025 361 Pfam Protein kinase domain 64 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0025 361 Gene3D Phosphorylase Kinase; domain 1 30 141 - -
Dod04g0025 361 SUPERFAMILY Protein kinase-like (PK-like) 40 346 IPR011009 -
Dod04g0025 361 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Dod04g0025 361 Gene3D Transferase(Phosphotransferase) domain 1 142 352 - -
Dod04g0025 361 ProSiteProfiles Protein kinase domain profile. 63 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g0025 361 PANTHER OS01G0750732 PROTEIN 1 360 - -
Dod04g0025 361 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 360 - -
Dod04g0025 361 PIRSF ILK 33 353 - -
Dod04g0025 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0025 Dod-Chr4 381690 384908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0025 46 344 Receptor kinase-like Gene Family AT3G58690 47.039 6.18e-90 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Dod04g0025 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0025 - - gmx:100820613 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0025 04 381690 384908 Dod04g0025 04 381690 384908 ECH