Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0020 ATGGCGGTGGCGCATGAAGAAGGGGAGAAAGGGAAGCTGCGGTGGTGGGAGCTGGAGGAGGAGGACGGTGAGGACCTCGACTTCCTGCTGCCACCTCGGCAGGTCATAGGGCCCGACGACAACGGCATAAAGAAGGTGATCGAGTACAAGTTCGACGACGAGGGCAACAAGGTCAAGATCACCACCACCAGTCGCACACGCAAGCTTGCCAACGCCCGCCTCAGCAAGCAGGCCGTCCTCCGCCGCCAATGGCCCAAGTTCGGCGACGCCGTCCACGAGGACGTCGGCAGCCGCCTCACCATGGTCTCCACCGAAGAGATCCTCCTCGAGCGCCCCAAGCCCCTCGGTGCTAAAACAGAGGAGCCAAAGGCTGCTGGAGACCCATTTAATCAAATCAACAAGGGTGCTGTTCTTATGGTCTGTAGAACTTGTGGGAAAAAGGGTGACCATTGGACCTCGAGGTGTCCCTACAAGGATCTTGCGCCGCCAACCGAGGGATTCGTCGATAAGCCTCCAATGTCGGATGGTGCAACTGCTGCGGCTGGTTCAACCAAGGGAGCATATGTGCCTCCTGGTATGAGAGCGGGTGCAGAGAGGACCGGATCAGACATGCGGCGTAGGAACGATGAGAATTCTGTGAGGGTCACCAATCTCTCAGAGGACACCAGAGAGCCCGATTTGCTTGAGCTGTTCCGTCCTTTTGGTGCTGTGAGCAGAGTGTATGTCGCTATTGATCAAAAGACTGGCATGAGCAGGGGATTTGGCTTTGTCAACTTTGTAAACAGGGAAGATGCACAAAGAGCTATCAACAAACTCAATGGATATGGCTATGACAGTCTCATCCTTAGAGTTGAATGGGCCACACCAAGGACAAACTGA 879 0.5552 MAVAHEEGEKGKLRWWELEEEDGEDLDFLLPPRQVIGPDDNGIKKVIEYKFDDEGNKVKITTTSRTRKLANARLSKQAVLRRQWPKFGDAVHEDVGSRLTMVSTEEILLERPKPLGAKTEEPKAAGDPFNQINKGAVLMVCRTCGKKGDHWTSRCPYKDLAPPTEGFVDKPPMSDGATAAAGSTKGAYVPPGMRAGAERTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDSLILRVEWATPRTN* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0020 292 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 211 289 IPR000504 GO:0003723
Dod04g0020 292 PIRSF Transl_init_eIF-3_RNA-bind 7 292 IPR017334 GO:0003743|GO:0005737|GO:0005852
Dod04g0020 292 MobiDBLite consensus disorder prediction 175 211 - -
Dod04g0020 292 CDD eIF3G 41 159 IPR024675 -
Dod04g0020 292 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 10 292 - -
Dod04g0020 292 CDD RRM_eIF3G_like 212 287 IPR034240 -
Dod04g0020 292 SMART rrm1_1 212 285 IPR000504 GO:0003723
Dod04g0020 292 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 10 292 - -
Dod04g0020 292 Pfam Eukaryotic translation initiation factor 3 subunit G 34 160 IPR024675 -
Dod04g0020 292 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 213 278 IPR000504 GO:0003723
Dod04g0020 292 Gene3D - 181 292 IPR012677 -
Dod04g0020 292 SUPERFAMILY RNA-binding domain, RBD 202 291 IPR035979 GO:0003676
Dod04g0020 292 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 12 291 IPR017334 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0020 Dod-Chr4 337830 339871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0020 12 290 Eukaryotic Initiation Factors Gene Family AT3G11400 68.489 1.20e-149 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0020 K03248 - gmx:100776807 501.901