Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0018 ATGAGGAGCCAGCGCCGGCAATCCTCATGCCTCTCTCCTGCAGCTCCTCCGACTGTGACCTACTCTGCGGCGAGGACAGCTCCGGAATCCTGTCCGGAGAGTCGCCGGAATGCTTGTCCTACCCGGATTGCTCTCAAAGTTCGTCATCGCCGGCATCATCTTCTTCGTCGACGGAGCAAATCCATCGCGGGATTCATGGAGCACGAGCGCAGCTTCGTCCCCGGGTTCGACTACCTGTCGAGGTTCCAGTCTCGCTCCCTCGATGCCAACGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTTCACGCATATTATGGGTTTCAGCCGCTGACGGCGTACCTTGCCGTCAATTACATGGATCGGTTTTTGGATTCTCGCCGGTTGCCGCAAACAAGTGGGTGGCCTCTGCAGCTTCTATCGGTTGCTTGTTTGTCTTTAGCGGCAAAGATGGAGGAACCTCTCGTTCCGTCTCTCTTGGACCTTCAGGTGGAAGGAGCTAAATACATATTTGAGCCGCGAACGATTCGTAGGATGGAACTACTTGTTCTGGGTGTCTTGGATTGGAGGCTAAGATCAGTCACCCCGTTTAGCTTCCTCGGTTTCTTTGCGTGCAAGATTGATTCAGCTGGAACTTTTACTGGGTTCCTCATTTCGCGGGCTTCAGAAATCATCTTATCTAATATCCAAGAGGCTAGCTTTCTTGCTTACAGGCCGTCATGCATTGCTGCCGCTGCAATGCTCTGTGCAGCCAATGAAATTCCTACTTGGTCTCTCGTTAAGCCTGAGCATGCTGAGTCATGGTGCGAGGGACTAAGAAAAGTAAGCATATGCAGTATGGAAAAAATTATAGGGTGCTACCAGTTGATGCAAGAACTTGTGATTGGCAATAACCAGAGGAAGCCCCCTGGAGTTTTACCGCAGATGCGAGTAACAACTCGGACCCGAATAAGGTCAAGTGTCTCATCATTCACATTGTCCGCTTCTTCATCCTCTTTCTCGTTGTCTTGTAAAAGGAGGAAATTAAATTAA 1032 0.5048 MRSQRRQSSCLSPAAPPTVTYSAARTAPESCPESRRNACPTRIALKVRHRRHHLLRRRSKSIAGFMEHERSFVPGFDYLSRFQSRSLDANAREESVAWILKVHAYYGFQPLTAYLAVNYMDRFLDSRRLPQTSGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLGVLDWRLRSVTPFSFLGFFACKIDSAGTFTGFLISRASEIILSNIQEASFLAYRPSCIAAAAMLCAANEIPTWSLVKPEHAESWCEGLRKVSICSMEKIIGCYQLMQELVIGNNQRKPPGVLPQMRVTTRTRIRSSVSSFTLSASSSSFSLSCKRRKLN* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0018 343 CDD CYCLIN 98 184 IPR013763 -
Dod04g0018 343 Gene3D - 65 288 - -
Dod04g0018 343 ProSitePatterns Cyclins signature. 92 123 IPR006671 -
Dod04g0018 343 SMART cyclin_7 97 185 IPR013763 -
Dod04g0018 343 Gene3D - 75 192 - -
Dod04g0018 343 PANTHER CYCLINS 59 340 IPR039361 -
Dod04g0018 343 SUPERFAMILY Cyclin-like 195 302 IPR036915 -
Dod04g0018 343 Pfam Cyclin, C-terminal domain 194 314 IPR004367 -
Dod04g0018 343 SUPERFAMILY Cyclin-like 64 191 IPR036915 -
Dod04g0018 343 Pfam Cyclin, N-terminal domain 65 191 IPR006671 -
Dod04g0018 343 SMART Cyclin_C_2 194 329 IPR004367 -
Dod04g0018 343 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 59 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0018 Dod-Chr4 323575 328445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0018 60 343 Core Cell Cycle Gene Families AT1G70210 66.434 2.52e-126 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0018 K18810 - gmx:100818190 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0018 04 323575 328445 Dod04g0018 04 323575 328445 ECH