Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0011 ATGACACAATCCAAGCTGACGACAAACTACTACCAAAAATCATGCCCCAAATTCTCAGAGGTCATCGAGCAGACGGTGACCGACAAACAGCTATCCATGCCGACCACGGCCGCCGGGGTGCTACGGCTATTCTTCCACGACTGCATGGTGGGAGGGTGCGACGCCTCCATCCTGGTGACCTCCAACTCGTTCAACAAGGCGGAGCGCGACGCCGACATCAATCTCTCCCTCGCCGCCGACGCCTTCGACGTGGTAGCACGCGCCAAGGCCGCCCTCGAGCTCGAATGCCCCGGCGTCTCCTCATGCTCCGACATCCTCGCGACGGCGGCGCGTGACCTCGTTGTGTTGGTCGGGGGGCCATTCTATGATGTCCGCCTGGGCAGGAAAGACGGATTGGAATCCAGGGCGGCCGACACCCAAGGGCAGTACCCCTTGCCAACCATGACCATGTCTCAGATCATATCTCTGTTCAACTCAAAAGGGTTCACAGAGCAAGAGATGGTGGCTCTTGTTGGTGCACACACCATAGGGTTCTCACACTGCAGGGAGTTCAGCAACAGGCTGTTCAAGTTCAGCAAGGAATCCGAATACGACCCGGCCTACAACCCCGAGTTTGCCGCGGGGCTTAGGAAGCTTTGCGAGAACTACACGAAGGACCCAACAATGGCCGCATTCAACGACGTCATAACTCCAGGCAAGTTCGACAACATGTACTACAGGAACTTGAAGAGAGGGCTGGGTTTGTTGGCTACGGACACTGCCCTTTTGTGGGACAACAGGACCAGACCCTTTGTGGACTTGTATGCTTCTAACCAGACCAAGTTCTTTCATGATTTTGCTCAAGCCATGCAGAAGCTTAGTGTCTTGCATGTTAAGACAGGAAGGAAAGGAGAGGTACGGTACAGCACCAATGAAGAAAGTCCAGAGTGCAGATATAACCTTATCGACAGAAGACATCTTGCTGGGCAGGAAGAAGCATACATAAGCGGCCTCTTTATCTCACCGGTGACATCGGCGAAAGAAAGAAGGCTACCACAGGTAGAGATCGACCCTGGGGCCTCCATCAACGTGATGCCACTGCGGGCCCTAGCCGATCTTGGAATTCATTCCTACGAGCCGGCTAAGTCAGACCAAGGTGACTATTCCGGGGTACAATGCCGACTCGCAAAGGGCCATCGGCAAGATTCGTCTCTTGTGTGTGCCAACACGGGATCTGTAACATTCCTCCCACTTGTGACTTAG 1242 0.5451 MTQSKLTTNYYQKSCPKFSEVIEQTVTDKQLSMPTTAAGVLRLFFHDCMVGGCDASILVTSNSFNKAERDADINLSLAADAFDVVARAKAALELECPGVSSCSDILATAARDLVVLVGGPFYDVRLGRKDGLESRAADTQGQYPLPTMTMSQIISLFNSKGFTEQEMVALVGAHTIGFSHCREFSNRLFKFSKESEYDPAYNPEFAAGLRKLCENYTKDPTMAAFNDVITPGKFDNMYYRNLKRGLGLLATDTALLWDNRTRPFVDLYASNQTKFFHDFAQAMQKLSVLHVKTGRKGEVRYSTNEESPECRYNLIDRRHLAGQEEAYISGLFISPVTSAKERRLPQVEIDPGASINVMPLRALADLGIHSYEPAKSDQGDYSGVQCRLAKGHRQDSSLVCANTGSVTFLPLVT* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0011 413 PANTHER - 4 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 CDD secretory_peroxidase 5 300 IPR033905 GO:0004601|GO:0042744
Dod04g0011 413 PRINTS Haem peroxidase superfamily signature 118 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 PRINTS Haem peroxidase superfamily signature 100 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 PRINTS Haem peroxidase superfamily signature 37 51 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 PRINTS Haem peroxidase superfamily signature 166 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 ProSitePatterns Peroxidases proximal heme-ligand signature. 166 176 IPR019793 -
Dod04g0011 413 SUPERFAMILY Heme-dependent peroxidases 6 302 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 PANTHER PEROXIDASE 6 4 301 - -
Dod04g0011 413 ProSitePatterns Peroxidases active site signature. 37 48 IPR019794 GO:0004601
Dod04g0011 413 ProSiteProfiles Plant heme peroxidase family profile. 5 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 Gene3D Peroxidase, domain 2 144 286 - -
Dod04g0011 413 Pfam Peroxidase 25 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 Gene3D - 9 302 - -
Dod04g0011 413 PRINTS Plant peroxidase signature 165 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 PRINTS Plant peroxidase signature 15 34 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 PRINTS Plant peroxidase signature 39 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 PRINTS Plant peroxidase signature 225 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 PRINTS Plant peroxidase signature 118 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 PRINTS Plant peroxidase signature 99 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 PRINTS Plant peroxidase signature 281 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 PRINTS Plant peroxidase signature 80 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g0011 413 PRINTS Plant peroxidase signature 241 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0011 Dod-Chr4 223086 225660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0011 6 300 Peroxidase AT5G47000 61.695 1.50e-136 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0011 K00430 - gmx:100781063 454.907