Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3375 ATGTACCAAAGCACATTGGCCGATATGCTTGAGAAAGATATGTTCATTGGATATGCCCCTAGTCCTGACTCAGCCTCATCATCTCCAGCATCTTTAACTGCTTCAAAATCGATGAATATGGAGAGCTTCCTCAATGCATTATGGGGGTTATCACCAAAGGTCATGATTGTAACTGAACAAGACTCTAATCACAATGGTTCGACTCTGATGGAGAGGCTACTGGAAGCTCTATATTCTTATGCAGCATTATTTGATTGCTTGGAAAGCACTCTCTCAAGGACATCAATGGAGAGAATAAGGGTGGAGAAGATGCTTTTCGGTGAGGAGATCAAGAACATTGTTGCGTGTGAGGGATCTGATCGAAAGGAAAGACATGAAAAGCTGGATAAGTGGCTGGATCGATTTGATTTGGCTGGGTTTGGCAATGTGCCTTTAAGCTATTTTGGTATGTTGCAAGCAAGGAGGTTCCTGCAGAGCTATGGTTGTGAGGGATATAAAATGAGGGATGAAAATGGTTGTGTAGTAATTTGCTGGCAGGATCGGCCCTTGTTTTCAATATCAGCTTGGAGATCTAGGAAGTAA 582 0.4261 MYQSTLADMLEKDMFIGYAPSPDSASSSPASLTASKSMNMESFLNALWGLSPKVMIVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTLSRTSMERIRVEKMLFGEEIKNIVACEGSDRKERHEKLDKWLDRFDLAGFGNVPLSYFGMLQARRFLQSYGCEGYKMRDENGCVVICWQDRPLFSISAWRSRK* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3375 193 PANTHER BNAA06G02820D PROTEIN 97 192 IPR030008 GO:0003700|GO:0005634|GO:0009739
Dod03g3375 193 Pfam GRAS domain family 36 190 IPR005202 -
Dod03g3375 193 ProSiteProfiles GRAS family profile. 1 190 IPR005202 -
Dod03g3375 193 PANTHER BNAA06G02820D PROTEIN 40 93 IPR030008 GO:0003700|GO:0005634|GO:0009739
Dod03g3375 193 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 97 192 IPR005202 -
Dod03g3375 193 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 93 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3375 Dod-Chr3 66396096 66396677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3375 1 193 GRAS Transcription Factor Family AT1G50420 66.667 5.32e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod03g3375 GRAS 4.7e-60 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3375 - - gmx:100814131 335.109