Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3374 ATGGTTCTTATAATGCAAGAAGAAGGGTCATCTTCTGCAACTTCTTCACCCTTGCAGTTCTTCCCCATGATGTCACTTTCACCTAGCTTAGGATCTCCCCATCCCTTGCTTAGGGAACTGAAATCTGAGGAAAGAGGTTTGTGTTTGATCCATTTGTTGGTCACTTGTGCAAACCATGTGGCGTCTGGCAGCCTTGACAATGCAAATGCCTTGCTTGAGCAAATTTCAATGCTTGCCTCACCTGATGGGGATACCATGCAGCGGATCGCAGCATATTTCACCGAAGCACTCGCTGATCGGATACTCAAAACATGGCCTGGGCTCCACAGAGCCCTTAACTCAACTAAAATGGTAATGATTTCTGAAGAAATCCTTGTTCAGAAGCTCTTCTTTGAGCTTTTCCCTTTCTTGAAGGTAGCATTTGTTCTGATAAATCAGGCTATCGTTGAAGCAATGGAACAGGAGAAGATGATTCATATAATTGATCTCAATGCTGCTGAACCTGCTCAGTGGATTGCCCTCCTCCAAGTTCTGAGCACTCGTCCTGAGGGTCCTCCTTATGTGAGAATCACTGGGATTCATCATAGGAAAAGATTCTTGACCAGGTAG 609 0.4499 MVLIMQEEGSSSATSSPLQFFPMMSLSPSLGSPHPLLRELKSEERGLCLIHLLVTCANHVASGSLDNANALLEQISMLASPDGDTMQRIAAYFTEALADRILKTWPGLHRALNSTKMVMISEEILVQKLFFELFPFLKVAFVLINQAIVEAMEQEKMIHIIDLNAAEPAQWIALLQVLSTRPEGPPYVRITGIHHRKRFLTR* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3374 202 PANTHER BNAA06G02820D PROTEIN 4 200 IPR030008 GO:0003700|GO:0005634|GO:0009739
Dod03g3374 202 ProSiteProfiles GRAS family profile. 40 202 IPR005202 -
Dod03g3374 202 Pfam GRAS domain family 49 197 IPR005202 -
Dod03g3374 202 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 200 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3374 Dod-Chr3 66395248 66395856 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3374 1 200 GRAS Transcription Factor Family AT1G50420 66.667 3.52e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod03g3374 GRAS 4.1e-54 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3374 - - qsu:112035642 317.005