Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3365 ATGAGTTCTTCCGTGGAAGACATCAACATGAATGGGGATGTTGCACTCCCAGGCTTCCGATTTCACCCCACAGAAGAGGAACTCCTTGATTTCTATCTCAAGAACATGGTTTCTGGCAAGAAACTTCGTTTCGATGTCATAGGCTTCCTCAACATCTACCATCATGATCCTCGGGACTTGCCTGGTTTGGCAAAGGTGGGGGAAAGAGAATGGTACTTCTTTGTGCCAAGGGACAAAAAGCATGGCACAGGGGGAAGGCCTAACCGCACAACTGAGAAAGGGTTCTGGAAAGCCACTGGTTCTGACCGGAAAATTGTGACTCTCTCTGATCCAAAGCGCATCATTGGATTGAGGAAGACCCTTGTTTTCTATGAGGGAAGAGCTCCACGGGGACAGAAGACCGATTGGGTCATGAATGAGTACCGTTTACCTGACACTTGCCGATTGCCTAAGGACATAGTGTTGTGCAAGATATACCGAAAGGCAACTTCCTTGAAAGTGCTGGAACAAAGGGCAGCGATGGAAGAAGAGATGAAGCAAATGGTTGGTTCCCCTGAATCAACTCCTTCCTCCACGGATACCATGTCCCTTAGCAGCCAACAAGAGGACCAAAACCTGCCCTTGTTACAACATGTCATTCTTAAGAAAGAAATTGAAGCTGAAGCTGAAGAAATGGTAACCATGGCAGTGCCAAAGCAAGAAAATTCAATGATTCAACTGCCTGTGAAAGACAACAAAACAACTTGTGGTACATCCCTGCAATTGCCCTTTGGGAAGGACAAGATCCCAGAGCTGCAGCTGCCCATGATGGTCACGGACTGGACCCAAGATACCTTTTGGGCTCAGTTGAATAGCCCATGGCTGCAAAATTTGACTCCTAATTACTCCAACATCTTAAACTTCTAA 906 0.4669 MSSSVEDINMNGDVALPGFRFHPTEEELLDFYLKNMVSGKKLRFDVIGFLNIYHHDPRDLPGLAKVGEREWYFFVPRDKKHGTGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGQKTDWVMNEYRLPDTCRLPKDIVLCKIYRKATSLKVLEQRAAMEEEMKQMVGSPESTPSSTDTMSLSSQQEDQNLPLLQHVILKKEIEAEAEEMVTMAVPKQENSMIQLPVKDNKTTCGTSLQLPFGKDKIPELQLPMMVTDWTQDTFWAQLNSPWLQNLTPNYSNILNF* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3365 301 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Dod03g3365 301 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
Dod03g3365 301 MobiDBLite consensus disorder prediction 183 199 - -
Dod03g3365 301 SUPERFAMILY NAC domain 10 161 IPR036093 GO:0003677|GO:0006355
Dod03g3365 301 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 13 301 - -
Dod03g3365 301 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 301 - -
Dod03g3365 301 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
Dod03g3365 301 MobiDBLite consensus disorder prediction 180 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3365 Dod-Chr3 66311948 66314502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3365 10 293 NAC Transcription Factor Family AT2G17040 60.351 5.15e-117 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod03g3365 NAM 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3365 - - adu:107477264 478.404