Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3359 ATGGAAGCTGTATTATTCGCCACCAAACCAGCTTCCCACCTCAAACTCCCTCCCAAACACACCTTCCCTTCTTCCTTCCCTCACCACCACAACCTCCCCATTCGCCACAAACCCAACAACTTCCCCACCCTCTCCGCCCTCCAAAGCCAACAACAACAACAACCACCACCACTACCAAAAGACAACGCCGCCGCCGAAGATGAATTCTACGGCGAGGTCAACAAAATCATCGGCAGTCGCGCCCTCCCCGGCACCGCCGCAATGGAATACCTCATCGAGTGGAAAGACGACCACGCCCCTTCCTGGCTCTCCGCCGACTTCATCGCCAAGGACGTCCTCTCCGAGTACGAGTCCCCCTGGTGGACCGCCGCCAAGAAAGCCGACGACGCCGCCCTCCGCCGCATCCTCGACTCCGACGACGGCCGCGACGTAAACGCCGTTGACTCCGACGGCCGCACCGCCCTCCTCTTCGTCGCCGGGCTCGGATCCGAGCCCTGCGTCAAAACCCTCGCTGAATCCGGCGCCGACCTCGACCACCGCGACAACGCCGGAGGCCTCACGGCGCTGCACATGGCGGCGGGGTACGTGAAACCCGGCGTCGCGAAGCTGCTGCTCGATCTCGGTGCGGATCCGGAGGTGGAGGACGATCGTGGAAGAACGGCGCTGGATCTGGCAAAGGAGATTCTGAAAGTGACGCCGAAGGGGAATCCGATGCAGTTCGGGAGGAGGATCGGTTTGGAAGGTGTGGTTAGGGTTTTGGAAGGTGCCGTTTACGAGTACGCGGAGGTGGAGGAGATTCTGGAGCGGAGAGGGAAGGGTGAGAATTTGGAGTATCTTGTGCGGTGGAAGGACGGTGGCGCGAACGAGTGGGTGAAGGCGAGGTTCGTGGCGGAGGATCTTGTGAGGGACTATGAAGCGGGTCTGGAGTACGCGGTGGCGGAGGCGGTGGTTGGGAAGAGGCTTGGGGATGAGGGGAAGCCCGAGTTTTTGGTTAAGTGGGCCGATATGAATGAGCCCACTTGGGAGCCCGAGGAGAATGTGGATCCTGAGCTCGTTAAGGAGTTTGAGTTGGGTAGTAGCGGTAATGATCAGGCTCAGCAAAGTAATGGGCCTGCTGTGGTGCTTTCGAATCTGGAAAGCCCCTGA 1146 0.6021 MEAVLFATKPASHLKLPPKHTFPSSFPHHHNLPIRHKPNNFPTLSALQSQQQQQPPPLPKDNAAAEDEFYGEVNKIIGSRALPGTAAMEYLIEWKDDHAPSWLSADFIAKDVLSEYESPWWTAAKKADDAALRRILDSDDGRDVNAVDSDGRTALLFVAGLGSEPCVKTLAESGADLDHRDNAGGLTALHMAAGYVKPGVAKLLLDLGADPEVEDDRGRTALDLAKEILKVTPKGNPMQFGRRIGLEGVVRVLEGAVYEYAEVEEILERRGKGENLEYLVRWKDGGANEWVKARFVAEDLVRDYEAGLEYAVAEAVVGKRLGDEGKPEFLVKWADMNEPTWEPEENVDPELVKEFELGSSGNDQAQQSNGPAVVLSNLESP* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3359 381 SUPERFAMILY Chromo domain-like 67 120 IPR016197 -
Dod03g3359 381 MobiDBLite consensus disorder prediction 359 381 - -
Dod03g3359 381 MobiDBLite consensus disorder prediction 17 63 - -
Dod03g3359 381 SUPERFAMILY Chromo domain-like 309 356 IPR016197 -
Dod03g3359 381 SUPERFAMILY Ankyrin repeat 115 227 IPR036770 -
Dod03g3359 381 SUPERFAMILY Chromo domain-like 259 307 IPR016197 -
Dod03g3359 381 ProSiteProfiles Ankyrin repeat profile. 150 182 IPR002110 GO:0005515
Dod03g3359 381 ProSiteProfiles Ankyrin repeat region circular profile. 184 216 - -
Dod03g3359 381 ProSiteProfiles Ankyrin repeat region circular profile. 150 182 - -
Dod03g3359 381 MobiDBLite consensus disorder prediction 41 58 - -
Dod03g3359 381 MobiDBLite consensus disorder prediction 340 381 - -
Dod03g3359 381 ProSiteProfiles Ankyrin repeat profile. 184 216 IPR002110 GO:0005515
Dod03g3359 381 PANTHER HOMEOBOX PROTEIN WARIAI 3 363 - -
Dod03g3359 381 ProSiteProfiles Chromo and chromo shadow domain profile. 261 290 IPR000953 -
Dod03g3359 381 SMART chromo_7 310 360 IPR000953 -
Dod03g3359 381 SMART chromo_7 259 309 IPR000953 -
Dod03g3359 381 SMART chromo_7 69 121 IPR000953 -
Dod03g3359 381 Pfam Ankyrin repeats (many copies) 173 225 IPR002110 GO:0005515
Dod03g3359 381 PANTHER SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC 3 363 IPR030300 GO:0009416|GO:0009507|GO:0045038|GO:0080085
Dod03g3359 381 Gene3D - 307 357 - -
Dod03g3359 381 Gene3D - 68 114 - -
Dod03g3359 381 Gene3D - 257 306 - -
Dod03g3359 381 Pfam Chromo (CHRromatin Organisation MOdifier) domain 313 356 IPR023780 -
Dod03g3359 381 SMART ANK_2a 150 179 IPR002110 GO:0005515
Dod03g3359 381 SMART ANK_2a 184 213 IPR002110 GO:0005515
Dod03g3359 381 SMART ANK_2a 115 146 IPR002110 GO:0005515
Dod03g3359 381 CDD CD3_cpSRP43_like 308 357 - -
Dod03g3359 381 ProSiteProfiles Chromo and chromo shadow domain profile. 311 356 IPR000953 -
Dod03g3359 381 Gene3D - 115 256 IPR036770 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3359 138 225 CAMTA Transcription Factor Family AT5G09410 37.234 1.33e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3359 K12271 - gmx:100818382 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3359 03 66214821 66216537 Dod03g3359 03 66214821 66216537 ECH