Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3353 ATGGATTCTGCTAGTTCCCAAGTAGTTGATAATGATGACCAATTTTCAAGGCCTGATCAAAGCCACGAGGCAAGGTGCTTGGTTCATAAGAAGTCTATATGCTCCAAACTTCTTGCCTCCATTGGTGCCCATGAAATTTGGTCAGTTGAGACATGGAAGGCAGCTTTGACAGAGTTAGTAGCAACTGCTTCTCTAATGTTCACACTGACAGCATCCATCATTGCATGCTTGGACTCACATGAGGTTGATCCTAAGCTCCTTGTTCCGATTGCAGTCTTCATCATAGCCTTCTTGTTCCTAATAGTGACAGTTCCTCTATCTGGGGGCCACATGAGCCCAGTTTTCACATTCATAGCCGCATTAAAGGGTGTTGTCACTCTTTCTCGTGCTCTCATTTATGTCATAGCACAATGCATTGGCTCAATTATTGGTTTCCTTATACTCAAGAATGTGATGCAACCAAAATTGGCAGATACATATTCCCTCGGAGGATGTGCCATTGGTGCAGGAAACTCTGGTGTGAAGCCACAAAATGCTTTGTTAGTGGAATTTTCATGCACATTTTTGGTACTATTTGTGGGGGTCACATTGGCATTTGACAAGAAAAGGTCCAAGGATTTGGGGTTACCTATGGTGTGCTTGGTGGTGGCTGGGGCCATGGCACTGGCAGTTTTTGTGTCCATAACTGTAACAGGGCAACCGGGCTATGCTGGTGTGGGCTTAAATCCAGCAAGGTGCTTGGGCCCAGCTTTGCTTAGGGGAGGAGCATTGTGGAATGGGCATTGGGTTTTCTGGGTTGGGCCTTTCTTGGCCTGCATAACCTATTATGGTGTGTCTATTAACCTACCAAAAGAGGGCTTGGATTGGGTAGATGGAGAATATGATGTCCTAAAGTTGGCCATTGGTTCATGTGGGAGTTTCTCAAGCAGTGCTGTTTCAAATGATCTTCAAGTACAAGGAAGTGCAGGGATTCAAGTAGCGGCAACAGTGCCCGAAAGATTAATCTGA 1008 0.4544 MDSASSQVVDNDDQFSRPDQSHEARCLVHKKSICSKLLASIGAHEIWSVETWKAALTELVATASLMFTLTASIIACLDSHEVDPKLLVPIAVFIIAFLFLIVTVPLSGGHMSPVFTFIAALKGVVTLSRALIYVIAQCIGSIIGFLILKNVMQPKLADTYSLGGCAIGAGNSGVKPQNALLVEFSCTFLVLFVGVTLAFDKKRSKDLGLPMVCLVVAGAMALAVFVSITVTGQPGYAGVGLNPARCLGPALLRGGALWNGHWVFWVGPFLACITYYGVSINLPKEGLDWVDGEYDVLKLAIGSCGSFSSSAVSNDLQVQGSAGIQVAATVPERLI* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3353 335 PRINTS Major intrinsic protein family signature 92 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g3353 335 PRINTS Major intrinsic protein family signature 182 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g3353 335 PRINTS Major intrinsic protein family signature 53 72 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g3353 335 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g3353 335 PRINTS Major intrinsic protein family signature 129 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g3353 335 PRINTS Major intrinsic protein family signature 262 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g3353 335 Gene3D Glycerol uptake facilitator protein. 10 282 IPR023271 -
Dod03g3353 335 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 20 311 - -
Dod03g3353 335 PANTHER AQUAPORIN-LIKE 20 311 - -
Dod03g3353 335 Pfam Major intrinsic protein 47 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod03g3353 335 SUPERFAMILY Aquaporin-like 49 274 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3353 Dod-Chr3 66178309 66179767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3353 45 272 Major Intrinsic Protein MIP AT3G61430 29.958 1.28e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3353 K09866 - gmx:100804160 466.848