Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3333 ATGGCCTCGTGTTCAGTTAGTTTCAATACTCTTGTACACGTTTGGCTTCTTGTGTTGTGTTTTGCCAATGAATTAGCTTTAGGTGTGTCAAGGCTTTCGCCCAGTGGTGGTTACATTAGCGGGGAGGTGCTAGCAGAACAAGAAGCGGATAGAGTGTATAGACTACCAGGGCAGCCTGAGGTGAACTTCAAGCAATATGCAGGCTATATCACAGTCAATGAAACTCATGGAAGAGCACTCTTCTATTGGTTCTTTGAGTCAACCGAGAAACCAGCAGAAAAACCTGTTCTTCTATGGCTCAATGGAGGCCCTGGTTGTTCCTCAATTGCTTATGGAGAAGCAGAGGAACTAGGACCCTTCTTTCCCCAGAACAGCAGTGAACCAAAGCTAAAGTTGAACCATTATTCTTGGAACAAAGCTGCAAATCTTTTGTTTCTGGAATCCCCTGTTGGAGTGGGATTCTCCTATACAAACACTAGCAGTGATATACGTGAGCTTGGTGATAAAATCACTGCTATGGATTCACACATCTTTATCACCAAATGGTTTAAGCGATTTCCACAATTCAGATCACACGAGTTCTACATTGCAGGCGAAAGCTATGCAGGACACTATGTTCCACAGCTTTCCGAGCTCATTTTTGATAATAATCGTAATCCTGCTAAGGAAGACTACATTGACTTCAAAGGGTTCATTATTGGAAATGCACTATTGGATGATGAAACGGATCAAAAGGGTATGATTGATTATGCATGGGATCATGCTGTGATATCCGATGGTTTGTACCATAACATCACAACCACATGCGATTTCAGCCTTGACAATCTAACAAAAGAATGCAATGTGGAACTCAACAAGTATTTCGCTGTGTATAAAATCATTGACATGTATAGCTTGTACACTCCAAGGTGTTTCAGCGTCACCAACAGCTCCAGCAAGGAAGCTCCTATAGTCAAAGGCGTAGCCCCTCATTCATTTTCAAAATTTCATGCGTGGCATCAAAGACTTGCTGGATATGATCCTTGTTCAACAGATTATACTGTAGTGTATCTAAATAGGCCAGAAGTGCAACAGGCACTGCATGCCAATGTCTCTAGAATTTCCTATGCATGGACTCCCTGCAGCGACATTATCTCGGCTTGGAATGACTCACCACAGTCCATGCTTCCTGTCCTCAAAAAGCTCATTGCTGGTGGAATTCGCATATGGGTTTACAGCGGAGATACCGATGGAAGAATTCCTGTAACTGCAACAAGATACACACTCAGAAAACTAGGACTTGGTATTGTTCAAGATTGGACTCCCTGGTATACCAGCCGACAGGTGGGAGGATGGACAATTGAATATGATGGGCTCACTTATGTGACCATAAGAGGTGCTGGTCATCAGGTCCCAACTTTCACTCCCAAGCAAGCTCTTCAGCTAGTTCGACATTTCTTAGTCAACAAGAAATTGCCAACTCAACCAATCAAACAAGCTCCCTTTTAA 1488 0.4308 MASCSVSFNTLVHVWLLVLCFANELALGVSRLSPSGGYISGEVLAEQEADRVYRLPGQPEVNFKQYAGYITVNETHGRALFYWFFESTEKPAEKPVLLWLNGGPGCSSIAYGEAEELGPFFPQNSSEPKLKLNHYSWNKAANLLFLESPVGVGFSYTNTSSDIRELGDKITAMDSHIFITKWFKRFPQFRSHEFYIAGESYAGHYVPQLSELIFDNNRNPAKEDYIDFKGFIIGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTTCDFSLDNLTKECNVELNKYFAVYKIIDMYSLYTPRCFSVTNSSSKEAPIVKGVAPHSFSKFHAWHQRLAGYDPCSTDYTVVYLNRPEVQQALHANVSRISYAWTPCSDIISAWNDSPQSMLPVLKKLIAGGIRIWVYSGDTDGRIPVTATRYTLRKLGLGIVQDWTPWYTSRQVGGWTIEYDGLTYVTIRGAGHQVPTFTPKQALQLVRHFLVNKKLPTQPIKQAPF* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3333 495 ProSitePatterns Serine carboxypeptidases, serine active site. 196 203 IPR018202 GO:0004185
Dod03g3333 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 489 IPR001563 GO:0004185|GO:0006508
Dod03g3333 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 145 IPR001563 GO:0004185|GO:0006508
Dod03g3333 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 156 IPR001563 GO:0004185|GO:0006508
Dod03g3333 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 207 IPR001563 GO:0004185|GO:0006508
Dod03g3333 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 452 465 IPR001563 GO:0004185|GO:0006508
Dod03g3333 495 SUPERFAMILY alpha/beta-Hydrolases 47 486 IPR029058 -
Dod03g3333 495 PANTHER CARBOXYPEPTIDASE 29 489 - -
Dod03g3333 495 Pfam Serine carboxypeptidase 56 481 IPR001563 GO:0004185|GO:0006508
Dod03g3333 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 452 469 IPR033124 GO:0004185
Dod03g3333 495 Gene3D - 342 378 - -
Dod03g3333 495 Gene3D - 388 481 - -
Dod03g3333 495 Gene3D alpha/beta hydrolase 46 306 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3333 Dod-Chr3 65980682 65989632 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3333 350 485 Calmodulin-binding Proteins AT2G22960 29.927 4.18e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3333 K16297 - gmx:100797264 801.971