LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod03g3329	ATGGCCACTTTCTGGACCTTGCTACTCTTTTGCTTCCTCCTCGCCACCATTGCCTCCTCCCAAAGACAACATTCCGGAGAAGAGGCGTGGCGGCAGCAGGAGGCCGACAGGGTGAAGGACTTGCCGGGACAGCCGCCGGTGAAATTCAGGCACTATGCTGGTTATGTGAAGCTAGGGCCACATGAAGAGAAGGCATTGTTCTATTGGTTCTTTGAAGCTCAAGAAGCACCCTCACAAAAGCCTCTTCTGCTTTGGCTTAATGGAGGACCTGGTTGCTCGTCCATTGCTTATGGAGCTGCACGAGAGCTTGGTCCATTTCTTGTTGAAGACAAAGAACTCCTCAAACTTAACAAATTCTCTTGGAACAGAGTTGCAAATGTTATATTCCTCGAGTCACCAGTTGGTGTTGGCTTTTCTTACACAAATAATTCCAAAGATTTACATGAACTTGGGGATGGAGTTACTGCTACTGATAACTATGCCTTCTTGATTGGTTGGTTCAAAAGGTTCCCTAGCTTCAGATCCCACGAGTTTTATATTGCTGGAGAAAGCTATGCAGGCCATTATGTTCCACAGCTCGCTGAGCTCATCCATGAAGGAAACAAAGATACCAAAAGGGGCTTTCACATAAATCTCAAGGGGTTCATGATGGGAAATGCCGTGATTAATGATCTTACAGATGTAAATGGCATGGTTGATTATGCTTGGAGCCACGCCATCATCTCAGACCAAGTATACAATGGCATAACAAAAAATTGTAACTTTAGTGCAGAAAACCAAACAAAGGCTTGCGACGTCAATCTTGCAGGATTTTTAGGAGCTTACTCTGAGATTGACATATATAGCATTTACTCACCCATTTGCCTCAATGACCATCAAAATCTACTTTCAGCCAAACTTGTCGTTGCCCCTCGTCTTCTCACACGACATGACCTGTGGCATACGCTACCATCAGGATACGATCCCTGTACAGAGGATTATCTTGCCAAATATTTCAATAATAAGGATGTACAAAAGGCCCTACATGCCAATATCACCAACTTGTCATATCCCTATACCCTTTGCAGCAATGTAATTCGGAAATGGAATGACTCACCAAACACAGTTCTGCCAACTATTCAGAAGCTCTTGCATGCCGGTTTACGCATTTGGATCTACAGTGGGGACACAGATGGTAGAGTTCCTGTGACATCAACAAGATACGGCATAAACAAGATGGGCTTGAAGATAAAGGAAGAGTGGAGAGCTTGGTTTAGTAATCGACAAGTGGCAGGGTGGATGGAGGTGTATGAGGGTGGCCTCACATTTGCCACCATCAGAGGTGCTGGCCACCAGGTTCCAGTCTTTGCACCACAGCAATCCCTTTCTCTCCTCACCCATTACCTCCATTCTCAAACCTTGCCAGCTTCTCGCTTCCAGCTGTATTAA	1428	0.4538	MATFWTLLLFCFLLATIASSQRQHSGEEAWRQQEADRVKDLPGQPPVKFRHYAGYVKLGPHEEKALFYWFFEAQEAPSQKPLLLWLNGGPGCSSIAYGAARELGPFLVEDKELLKLNKFSWNRVANVIFLESPVGVGFSYTNNSKDLHELGDGVTATDNYAFLIGWFKRFPSFRSHEFYIAGESYAGHYVPQLAELIHEGNKDTKRGFHINLKGFMMGNAVINDLTDVNGMVDYAWSHAIISDQVYNGITKNCNFSAENQTKACDVNLAGFLGAYSEIDIYSIYSPICLNDHQNLLSAKLVVAPRLLTRHDLWHTLPSGYDPCTEDYLAKYFNNKDVQKALHANITNLSYPYTLCSNVIRKWNDSPNTVLPTIQKLLHAGLRIWIYSGDTDGRVPVTSTRYGINKMGLKIKEEWRAWFSNRQVAGWMEVYEGGLTFATIRGAGHQVPVFAPQQSLSLLTHYLHSQTLPASRFQLY*	476

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod03g3329	475	SUPERFAMILY	alpha/beta-Hydrolases	33	468	IPR029058	-
	Dod03g3329	475	Gene3D	-	323	360	-	-
	Dod03g3329	475	ProSitePatterns	Serine carboxypeptidases, serine active site.	180	187	IPR018202	GO:0004185
	Dod03g3329	475	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	23	465	IPR001563	GO:0004185\|GO:0006508
	Dod03g3329	475	Pfam	Serine carboxypeptidase	42	463	IPR001563	GO:0004185\|GO:0006508
	Dod03g3329	475	Gene3D	-	369	463	-	-
	Dod03g3329	475	Gene3D	alpha/beta hydrolase	32	290	IPR029058	-
	Dod03g3329	475	PRINTS	Carboxypeptidase C serine protease (S10) family signature	117	129	IPR001563	GO:0004185\|GO:0006508
	Dod03g3329	475	PRINTS	Carboxypeptidase C serine protease (S10) family signature	130	140	IPR001563	GO:0004185\|GO:0006508
	Dod03g3329	475	PRINTS	Carboxypeptidase C serine protease (S10) family signature	166	191	IPR001563	GO:0004185\|GO:0006508
	Dod03g3329	475	PRINTS	Carboxypeptidase C serine protease (S10) family signature	434	447	IPR001563	GO:0004185\|GO:0006508
	Dod03g3329	475	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 35	23	465	-	-
	Dod03g3329	475	ProSitePatterns	Serine carboxypeptidases, histidine active site.	434	451	IPR033124	GO:0004185

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod03g3329	Dod-Chr3	65962267	65969142	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod03g3329	328	467	Calmodulin-binding Proteins	AT2G22960	30.496	6.56e-14	68.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod03g3329	K16297		-	gmx:100799746	795.808