Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3308 ATGTACTTGAGGAGAATACAATGCAGAGATCGGAGATGGGCTTTAGTATTGCAGCCATCAAAATACTTTTTTAGGCCAAGATTCTCAGACCATGCATGCGGTCAATATTTTCCCCATAAGACCACCGTGAAAGAATATGCTTCACATGGTAGTTTTATCAGAAGACATATTTTAAGTGCAGATTCATTTAGGTCTGCTTCATCTAGAAATAGTTGTGCTGGTTTGAACAGAAGGCATAGTTTATGTAAGAGTACTCAGCTACGTGCTTATAGTTCTGAAAGTGATGGAAGAAATACAAGTGAGGATAAACAGGTGCACGTCAATGATGGAGCTAACTTCGATAAGGGGAAGAATCACCAAGAGAAGTTCGGGAAAGATGCCAAGTACTGCAATGCACATGCACGACTTGGAGAACAGGATCAAGAGGAATGGCTTAATAATGAGAAGCTTGCCATTGAAAGTAAAAGGAAAGAATCACCCTTTTTGACAAGAAGGGATAGGTTTAAAAAAGAGTTTCTGAGAAGAATTGTTCCTTGGGAAAAAATAAACATTTCATGGGACACATTTCCTTATCACATTAATGAGCATACCAAAAGTCTTCTGGTGGAATGTGCTGCTTCCCATTTGAGACATAATACTTTTGCTTCGTCTTTTGGCGCTGGTCTCACATCTTCAAGTGGGAAAATATTGCTTCAGAGTGTTCCTGGCACTGAACTCTATCGTGAAAGATTAGTTAGAGCTCTTGCACATGATTTACAAGTTCCATTGTTGGTGCTTGATAGCAGCATCCTTGCTCCTTATGATCTTGATGATGATTTATCATCAGACTACGAGTCTGAAGATGATAATGCAGACTCTGGGGCAGAGGGTTCTCTGGAGTCGGAGAATGAGGATGACAATGATGCTAGCAATGAAGAAGAGTGGACTAGCAGTAATGAGGTGAAGTCTGATGCAAGTGACAATGAAGATGCAATAGCATCTGCTGAAGCTGCTCTTAAGAAGGTTAAAGCAGCTGTTCAGAAACTTGTTCCTTACAACATTGAGGAATTTGAAAAGATAACGTCTGGAGAATCTGAGAGTTCTGAGTCATCCAAGTCTAATGATGTCAAGTCTGCTGATAAATCTGGATGCCAGCTAAGGAAAGGTGACCGCGTGAAGTACATTGGGCCATCTACTCGAGCTACAGTTGATGATAGGATCAGACTGGGGAAGATTATGACATCTGATGGTCCAACTAATGCATATACTGTTATACATGGCAGGCCTTTAACTAACGGTCAGAGAGGAGAGGTATATGAAGTGAGCGGAGATCAAGTTGCTGTTATCATGGATGTTAATGAAGATCGTGCCAATGAGGGTGGGGTGGAGAACCTTACTGACGATCATACAAAACCATCAATTCTTTGGCTACATGTTAAAGACATCGAGAATGATCTTGATGCTCAAGCACTAGATTGCTACATAGCACTGGAGGCTCTATGTGAGGTTTTGCATTCAAAACAACCTCTTATTGTCTATTTTCCAGACGGCTCACAGTGGTTGCATAAATCAGTTCCAAAATCAAACCGTGATGAGTTTTTTCATAAGGTTGAAGAGTTGTTTGACCGGTTATCTGGCCCCATAGTATTGATCTGTGGGCAAAGCAAAGTCCAGTCAGGATCAAAGGAGAAAGAACAATTTACGATGATACTTCCAAACTTTGGACGCGTTGCTAAGCTGCCTCTTTCTCTGAAGCGTTTGACTGAGGGATTTAGAGGTGCAAAGAGATCGGATGATGATGAAATTCACAAGCTCTTTTCTAATGTTTTGTGTGTACATCCACCTAAGGATGAGAATCTGCTGGCAACATTTAAGAAACAACTTGATGAAGACAGGAAAATAGTTATTTCACGAAGTAATTTAAATGAACTAAGGAAGGTTCTTGAAGAACATCAGCTATCATGCACGGACCTATTGCATGTAAATACTGATGGCATCATTTTGACAAAGCAAAAAGCCGAAAAAGTGATAGGCTGGGCAAAAAATCATTACTTGTCATCATGCCTGCTTCCTTCTGTTAAAGGAGAACGATTGTGCCTCCCTCGGGAAAGTCTTGAAATTGCTATCTCAAGGTTGAAGGGCCAGGAAAATATATCACGGAAGCCTTCTCAAAACCTCAAGAATCTTGCCAAGGATGAGTTCGAGAGCAATTTCATCTCAGCTGTAGTACCTCCTGGTGAAATTGGGGTGAAGTTTGATGATATAGGTGCTCTTGAAGATGTGAAGAAGGCACTTAATGAATTAGTTATTCTTCCTATGAGAAGGCCAGAGCTTTTTTCTCATGGAAACTTGTTGCGGCCCACCAAAGGAATATTACTTTTTGGTCCTCCTGGAACTGGGAAAACTCTTCTGGCCAAGGCACTTGCAACAGAAGCTGGTGCTAATTTTATCAGCATAACTGGTTCAACTCTCACTTCAAAGTGGTTCGGAGATGCTGAAAAGCTAACCAAAGCCCTCTTCTCCTTTGCCAGCAAGCTTTCTCCCGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGCGCTCGAGGTGGTGCTTTTGAGCATGAAGCCACCAGAAGAATGAGGAACGAGTTCATGGCAGCTTGGGATGGATTGAGATCAAAAGAAAACCAAAGAATCCTCATTCTTGGTGCAACAAACCGGCCATTTGACCTTGATGATGCTGTTATTCGTCGCTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGTAAACCGAATGAAGATTTTGAGAATATTTCTGGCACAAGAGAATTTGGATCCTGGTTTTCAGTATGAGAAACTTGCTTATTTGACTGAAGGATACTCTGGCAGTGATCTGAAGAACCTCTGCATCGCTGCAGCATATAGACCTGTTCAGGAGCTGATAGAGGAAGAAAAGAAGGGAGGAAGTAATAGTACAACTCCGGTATTAAGGCCTCTCAATTTAGACGATTTTAGTCAGTCGAAATCCAAGGTTGGTCCATCAGTTGCATATGATGCAACAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGAGAAGGCGGTAGTAGGACAAAAACATCATTTGGATTTGGCAACTGA 3114 0.4133 MYLRRIQCRDRRWALVLQPSKYFFRPRFSDHACGQYFPHKTTVKEYASHGSFIRRHILSADSFRSASSRNSCAGLNRRHSLCKSTQLRAYSSESDGRNTSEDKQVHVNDGANFDKGKNHQEKFGKDAKYCNAHARLGEQDQEEWLNNEKLAIESKRKESPFLTRRDRFKKEFLRRIVPWEKINISWDTFPYHINEHTKSLLVECAASHLRHNTFASSFGAGLTSSSGKILLQSVPGTELYRERLVRALAHDLQVPLLVLDSSILAPYDLDDDLSSDYESEDDNADSGAEGSLESENEDDNDASNEEEWTSSNEVKSDASDNEDAIASAEAALKKVKAAVQKLVPYNIEEFEKITSGESESSESSKSNDVKSADKSGCQLRKGDRVKYIGPSTRATVDDRIRLGKIMTSDGPTNAYTVIHGRPLTNGQRGEVYEVSGDQVAVIMDVNEDRANEGGVENLTDDHTKPSILWLHVKDIENDLDAQALDCYIALEALCEVLHSKQPLIVYFPDGSQWLHKSVPKSNRDEFFHKVEELFDRLSGPIVLICGQSKVQSGSKEKEQFTMILPNFGRVAKLPLSLKRLTEGFRGAKRSDDDEIHKLFSNVLCVHPPKDENLLATFKKQLDEDRKIVISRSNLNELRKVLEEHQLSCTDLLHVNTDGIILTKQKAEKVIGWAKNHYLSSCLLPSVKGERLCLPRESLEIAISRLKGQENISRKPSQNLKNLAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFSHGNLLRPTKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLSPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAVNRMKILRIFLAQENLDPGFQYEKLAYLTEGYSGSDLKNLCIAAAYRPVQELIEEEKKGGSNSTTPVLRPLNLDDFSQSKSKVGPSVAYDATSMNELRKWNEMYGEGGSRTKTSFGFGN* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3308 1037 Gene3D - 916 1001 - -
Dod03g3308 1037 SMART AAA_5 780 917 IPR003593 -
Dod03g3308 1037 MobiDBLite consensus disorder prediction 95 118 - -
Dod03g3308 1037 MobiDBLite consensus disorder prediction 92 118 - -
Dod03g3308 1037 CDD AAA 778 915 - -
Dod03g3308 1037 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 1035 - -
Dod03g3308 1037 MobiDBLite consensus disorder prediction 272 321 - -
Dod03g3308 1037 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1035 - -
Dod03g3308 1037 MobiDBLite consensus disorder prediction 353 376 - -
Dod03g3308 1037 Pfam AAA+ lid domain 939 973 IPR041569 -
Dod03g3308 1037 ProSitePatterns AAA-protein family signature. 887 906 IPR003960 GO:0005524|GO:0016887
Dod03g3308 1037 MobiDBLite consensus disorder prediction 272 306 - -
Dod03g3308 1037 Pfam ATPase family associated with various cellular activities (AAA) 784 914 IPR003959 GO:0005524|GO:0016887
Dod03g3308 1037 Gene3D - 743 1019 IPR027417 -
Dod03g3308 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 742 964 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3308 Dod-Chr3 65732476 65750938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3308 743 975 Calmodulin-binding Proteins AT3G56690 36.864 7.95e-39 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3308 - - gmx:100802939 1675.6