Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3307 ATGTCTCGCCAAACGACGTCGTCGGCCTTCACTAAAGACAAGACCCTCGTCAACAAATATATGCTGGGAGAGGAGATTGGGAAAGGAGCTTATGGTCGAGTTTACAAAGGTTTGGACCTGGATAATGGAGAATATGTTGCAATTAAACAGGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATCATCATGCAAGAGATTGATTTGTTAAAGAATTTGAACCACAAAAACATTGTAAAGTATCTTGGATCCTTCAAGACAAAGAGTCACCTGCACATAATTCTTGAGTATGTGGAGAATGGTTCACTTGCAAATATAATCAAGCCAAATAAATTTGGTCCTTTTCCAGAATCATTGGTTGCTGTGTATATTGCCCAGGTGTTGGAAGGCTTGGTTTATCTACATGAACAGGGTGTTATCCATCGGGATATTAAGGGTGCAAACATATTGACGACTAAAGAGGGTCTTGTCAAACTTGCTGATTTTGGTGTTGCAACAAAATTAACAGAGGCTGATGTTAATACACATTCAGTTGTTGGAACACCATACTGGATGGCCCCAGAGGTTATAGAAATGTCTGGGGTTTGTGCTGCTTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGTGTACCTCCTTATTATGATTTACAGCCTATGCCAGCTCTTTTCCGTATTGTCCAGGATGAGCATCCTCCAATTCCTGATAGTTTGTCAGCTGACATTACTGATTTTCTGCATCAATGCTTTAAGAAGGATGCTAGACAAAGACCTGATGCTAAAACGTTGCTTTCTCACCCATGGATCCAAAACTGTAAGCGTGCCCTGCAGTCTTCTCTCCGTCATAGTGGAACATTAAGTGCTACCTCTGGCAGAAATATAGAGGAAGATGATTCTGCAGATTCACAAGTTGCTGCAGGTGCTCGTAAGAGTACTGGTGAAAGCTCTTATGTGGAGAAAGAGGACCCTGCAAAGGAGTTTTCCATTGTGGCTGCTGATAGCAGCAAATCTCATGAAGACATTGCTTCAGATTCTAATTTTCTCAATGAAAGAACAGAGAAGGCAGATGATGTTCCATCAGATCAGGTTCTTACCTTAGCCATTCCTGAGAAGTCATTTCTACCGACTGGTTCAGGCAAACTCTCTTCTAGTAAAGAAGTGGTTGGTTCTGGGCCAACTGACGATCATGGGATTTCAAGTGCTAAAGACCATGAAGTCTTGATAAATGGAGAAGTTGGATCTCCACAATCAAGAGGGATGGCTAATAAGCTTGGAGGAAAAGACAGTTCTATCAATAATGGCAATAAATCATTTGCTTTTGGACCAAGAGGCCAAGATAATGGTTCCCGAACGGCAATGAAGACACCACCCCATGCGGAAGGAAATGAGCTGAGTAGATTTAGTGACCCTCCAGGAGATGCCTACTTAGATGATTTATTTCATTCATTAGACAAACAACCAGGGGATGTCGTAGCTGAGGCATCCACATCTGCATCCACTTCACATATGGCTAAAGGCAATGGATCTATGAATGATGGTGGGAAAAATGACCTGGCCAAGGAGTTGAGGGCTACAATTGCTCGAAAACAATGGGAGAAGGAGAGTGAAATTGGGCAGGCAAACAATGGTGGGAACCTTCTACACCGAGTGATGATAGGTGTTTTAAAAGATGATGTAATTGACATAGATGGTTTGGTCTTTGACGAAAAACTTCCTGGAGAAAACATTTTTCCTCTGCAGGCTGTTGAGTTTAGCAGATTAGTTGGTTCATTACGACCAGAGGAATCAGAAGACGTGATTGTCTCTGCATGTCAGAGACTTATTGGTATATTACACCAGCGTCCAGAGCAGAAGATTGTTTTTGTTACCCAGCATGGTTTACTTCCTCTGGCAGACTTGCTAGAAGTTCCAAAAACACGTGTCATATGTTCTGTGCTTCAGCTTATAAATCAAATAATTAAAGACAACACTGATTTTCAAGAAAATGCATGCCTTATTGGATTGATTCCTGCAGTCATGAGCTTTGCAGTACCTGATCGTCCCCGAGAGATTCGAATGGAAGCAGCTCATTTTTTACAGCATCTTTGTCAGTCAAGTTCTTTGACGTTACACATGTTTATAGCTTGCCGTGGAATACCTGTTTTGGTGGGATTTCTTGAGGCTGACTATGCGAAGTATAGGGAAATGGTTCATCTGGCTATTGATGGCATGTGGCAGGTATTTAAGCTTCAACAGGCAACACCCAGAAATGACTTCTGTCGGATTGCGGCAAAGAATGGAGTACTCCTTAGGCTTATAAATACTCTTCATAGCTTAAATGAGGCAACTCGGCTAGCTTCTATGTCTGTTGGGGGTGGATATATGGGTGATGGATCAGCTCAGTGGCCACGTTCTGGAATGTTGGATTCTACACATCCTTTTATCATTCATAATGAGGCAATGCTCTCTTCAGCAGATCAGCAGGATCTACCTAAAGTGAGGCGTGGAGTACTTGACCACCACGTAGAACCTTCACAGGCTTCAACCTCCAATCCTCGAAGATCAGATGCTAACTACCCTGTGGATGTTGATAGGCCTCAATCTAGCAATGCAGCAGCTGAACTCAGGGAATCTTCTAGTGCACCAAAAGAGCGAGAGAATGTGGATCGTTGGAAAAGTGATCCTTCTCGAGCAGATGTTGAACCCAGACAGCAGCGTCTCAGTATCTCTGCTAACAGGACATCAACAGATAGACCTCCAAAATTAACAGATCCTGCATCCAACGGGTTATCAGTAACAGGAGTGTCACAGCAAGAGCAAGTTAGGCCTCTTCTAAGCTTGTTGGAGAAAGAGCCCCCATCTGGACGCTTTTCTGGCCAGCTTGAGTATGTGCGTCAGTTTTCAGGATTAGAAAGACATGAAAGTGTACTTCCTTTGTTACATGCCTCTGAGAAGAAAACAAATGGGGAATTAGACTTTCTGATGGCAGAATTTGCAGGAATTTCTCAACGCGGAAAAGAAAATGGAAATCTTGACTCTGGTTCCAGAGGGTCTCACAAAGTTGCTTCCAAGAAATTAGGGACTTTAGGCTCTAGTGAAGGAGCTGCTTCCACATCTGGGATTGTGTCTCAGACAGCGTCAGGTGTGCTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGTAGTGCAACTTCGTCTGGCCTACTTTCCCACATGGTTTCGTCATTGAATGCAGATGTTGCTAGGGAGTACCTAGAAAAGGTGGCAGATCTTCTGCTTGAATTTGCACAAGCAGACACAACAGTGAAGTCTTTCATGTGTAGCCAGAGCTTGCTTAGTCGTCTTTTCCAGATGTTTAATAGGGTGGAGCCTCCTATTCTCTTGAAGATACTGAAGTGTATTAATCATCTGTCAACTGATCCAAATTGCTTAGAAAATCTGCAGCGTGCTGAAGCTATAAAATACTTGATACCAAATCTTGAACTCAAAGAAGGATCTCTTGTATCGGAGATACATCATGAGGTCTTGAATGCACTGTTCAATTTATGCAAAATAAATAAGAGGAGACAAGAGCAAGCAGCTGAGAATGGGGTTATTCCCCATTTGATGCAATTCATCACATCAAATTCCCCCTTGAAACAATACGCATTGCCTCTGCTATGTGACATGGCTCATGCATCTCGCAATTCAAGGGAGCAGTTAAGGGCTCAGGGTGGTTTGGATGTCTATTTGAACCTTCTTGAGGATGATCTTTGGTCTGTGACTGCCCTAGATTCTATTGCTATTTGCTTAGCCCATGACAATGACAATAAGAAGGTGGAACAAGCATTACTGAAAAAGGATGCAGTTCAAAAGCTTGTGAAGTTCTTCCAGTGCTGTCCAGAGCAGCATTTTGTACACATATTGGAGCCATTCTTGAAAATTATCACAAAATCTGCAAGGATCAATACCACATTAGCTGTTAATGGATTAACACCATTGCTCATTGCAAGGCTTGATCATCAGGATGCTATTGCTCGTCTTAATTTACTCAGGCTAATAAAGGCCGTTTATGAGCATCATCCTCAACCCAAGAAGTTGATTGTGGAGAATGATCTACCGGAGAAACTTCAAAACTTAATAGGCGAAAGGAGAGATGGACAGGTGTTGGTTAAACAGATGGCTACTTCATTACTTAAAGCACTACACATAAACACCGTTTTGTAA 4200 0.4248 MSRQTTSSAFTKDKTLVNKYMLGEEIGKGAYGRVYKGLDLDNGEYVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSFKTKSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSADITDFLHQCFKKDARQRPDAKTLLSHPWIQNCKRALQSSLRHSGTLSATSGRNIEEDDSADSQVAAGARKSTGESSYVEKEDPAKEFSIVAADSSKSHEDIASDSNFLNERTEKADDVPSDQVLTLAIPEKSFLPTGSGKLSSSKEVVGSGPTDDHGISSAKDHEVLINGEVGSPQSRGMANKLGGKDSSINNGNKSFAFGPRGQDNGSRTAMKTPPHAEGNELSRFSDPPGDAYLDDLFHSLDKQPGDVVAEASTSASTSHMAKGNGSMNDGGKNDLAKELRATIARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENIFPLQAVEFSRLVGSLRPEESEDVIVSACQRLIGILHQRPEQKIVFVTQHGLLPLADLLEVPKTRVICSVLQLINQIIKDNTDFQENACLIGLIPAVMSFAVPDRPREIRMEAAHFLQHLCQSSSLTLHMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQQATPRNDFCRIAAKNGVLLRLINTLHSLNEATRLASMSVGGGYMGDGSAQWPRSGMLDSTHPFIIHNEAMLSSADQQDLPKVRRGVLDHHVEPSQASTSNPRRSDANYPVDVDRPQSSNAAAELRESSSAPKERENVDRWKSDPSRADVEPRQQRLSISANRTSTDRPPKLTDPASNGLSVTGVSQQEQVRPLLSLLEKEPPSGRFSGQLEYVRQFSGLERHESVLPLLHASEKKTNGELDFLMAEFAGISQRGKENGNLDSGSRGSHKVASKKLGTLGSSEGAASTSGIVSQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNADVAREYLEKVADLLLEFAQADTTVKSFMCSQSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLNALFNLCKINKRRQEQAAENGVIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAQGGLDVYLNLLEDDLWSVTALDSIAICLAHDNDNKKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSARINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL* 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3307 1399 SMART arm_5 1184 1223 IPR000225 GO:0005515
Dod03g3307 1399 SMART arm_5 619 659 IPR000225 GO:0005515
Dod03g3307 1399 SMART arm_5 1138 1182 IPR000225 GO:0005515
Dod03g3307 1399 Gene3D - 580 789 IPR011989 -
Dod03g3307 1399 MobiDBLite consensus disorder prediction 876 899 - -
Dod03g3307 1399 SUPERFAMILY ARM repeat 1268 1391 IPR016024 -
Dod03g3307 1399 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3307 1399 SUPERFAMILY ARM repeat 592 1290 IPR016024 -
Dod03g3307 1399 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3307 1399 MobiDBLite consensus disorder prediction 901 934 - -
Dod03g3307 1399 MobiDBLite consensus disorder prediction 381 521 - -
Dod03g3307 1399 Gene3D - 1051 1396 IPR011989 -
Dod03g3307 1399 MobiDBLite consensus disorder prediction 342 363 - -
Dod03g3307 1399 CDD STKc_Cdc7_like 19 274 - -
Dod03g3307 1399 MobiDBLite consensus disorder prediction 431 457 - -
Dod03g3307 1399 Gene3D Transferase(Phosphotransferase) domain 1 17 313 - -
Dod03g3307 1399 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3307 1399 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 1358 - -
Dod03g3307 1399 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Dod03g3307 1399 MobiDBLite consensus disorder prediction 291 365 - -
Dod03g3307 1399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Dod03g3307 1399 MobiDBLite consensus disorder prediction 839 934 - -
Dod03g3307 1399 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Dod03g3307 1399 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Dod03g3307 1399 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Dod03g3307 1399 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Dod03g3307 1399 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Dod03g3307 1399 PANTHER MAP KINASE KINASE KINASE 2 1358 - -
Dod03g3307 1399 MobiDBLite consensus disorder prediction 497 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3307 Dod-Chr3 65712968 65731424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3307 1 1399 MAP Kinase Kinase Kinase AT3G13530 71.489 0.0 1966
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Dod03g3307 Pkinase 1.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3307 - - aprc:113864564 2419.81