Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3300 ATGCTTCTGGACAAGAATGCGAATGAGGAAACACATTATGATGTTCTTGATGTTAAGGAAGATGCAAGTTACGAAGAAATCCGTGCTAGTTACCGTGCTGCTGTACTCAGTTTGCATCCTGACAAGCTATTGAAGACATCTGATGCATCCAGCAGCAATCAAACTAGTGGAGATAGATTTCTCAGAGTACAGAAGGCATGGGAAGTTCTTGGCAATTCGAGCTCTCGTTTATTTTATGATAATCAGCTGAAAAGTTTGAGGCGTGATGATGTCTTGGCTGTTGAAGTTGCAGAAGATTTAAGCTTACAAGATATGATAGCTGATGATGATGGAGAAGCATTGGAACTGTTTTATCAGTGCCGATGTGGTGATTACTTCTCTGTAGACTCATTGGAGTTGCAGAAAATGGGTTATTCGCTGCTGAGGTATGGAAGTAGGATATCTATACTGAACAATGATTCTTTACCAGGATCAGTGATTCTTCCCTGTGGATCTTGTTCACTAAAAGCTCGTCTGGTAATCACAATGGATGACAACTGA 540 0.4074 MLLDKNANEETHYDVLDVKEDASYEEIRASYRAAVLSLHPDKLLKTSDASSSNQTSGDRFLRVQKAWEVLGNSSSRLFYDNQLKSLRRDDVLAVEVAEDLSLQDMIADDDGEALELFYQCRCGDYFSVDSLELQKMGYSLLRYGSRISILNNDSLPGSVILPCGSCSLKARLVITMDDN* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3300 179 SUPERFAMILY CSL zinc finger 96 178 IPR036671 -
Dod03g3300 179 Pfam CSL zinc finger 99 173 IPR007872 -
Dod03g3300 179 Pfam DnaJ domain 11 80 IPR001623 -
Dod03g3300 179 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Dod03g3300 179 SUPERFAMILY Chaperone J-domain 7 83 IPR036869 -
Dod03g3300 179 SMART dnaj_3 10 75 IPR001623 -
Dod03g3300 179 CDD DnaJ 11 72 IPR001623 -
Dod03g3300 179 Gene3D DnaJ domain 2 88 IPR036869 -
Dod03g3300 179 PRINTS DnaJ domain signature 31 46 IPR001623 -
Dod03g3300 179 PRINTS DnaJ domain signature 13 31 IPR001623 -
Dod03g3300 179 PRINTS DnaJ domain signature 55 75 IPR001623 -
Dod03g3300 179 PANTHER DPH3 HOMOLOG-RELATED 1 176 IPR044248 GO:0017183|GO:0046872
Dod03g3300 179 Gene3D DPH Zinc finger 91 179 IPR036671 -
Dod03g3300 179 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 96 175 IPR007872 -
Dod03g3300 179 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 4 1 176 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3300 12 82 C2H2 Transcription Factor Family AT1G74250 39.437 3.73e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3300 K17867 - gmx:100814856 282.722