Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3288 ATGGAGGAAGTTGAGGGGAAGATACGTGTGGAGGATGCACCGACAGTGGAGGAGGAGTCGCTGATGTCAACGGCGAAGGAAGACATGGCCTCTATAGCTTCTCCAATTTGGATCACATGGTATCAAGCAAGCCCCTCATACAGGGATGGCTCTCGGGAATGTTCTAACCTAGCCAAGCGAGCTTGTACGAGCTCGCCAAGCGAAGCCATAGTTTCTAGAAGGGTTTTAGAACTTGCTCCCAAACGTGGTGGAAAAGCTCCCGTTCCAGCTGCAAAGAAGAAGGCCGAGAAGGTTACGAACCCGTTGTTCGAGAAGCGTCCGAAGCAGTTCGGGATCGGAGGGGCATTGCCACCGAAGAGAGACCTGACACGATTCGTGAAGTGGCCGAAGACCGTCCAAATCCAGAGGAAGAAGAGGATCCTCAAGCAGAGGTTGAAGGTCCCACCAGCTTTGAACCAATTCACCAAAACCCTCGACAAGAACCTCGCTACAAGCCTTTTCAAGATACTACTGAAGTACAGGCCTGAGGATAAGGCAGAGAAGAAGGAGCGGCTTTTGAAAAGGGCCCAGGCTGAGGCTGAGGGAAAAACTGTTGAAGCTAAGAAGCCTATTGTTGTGAAGTATGGCCTCAACCATGTTACCTACCTTATTGAGCAGAATAAGGCTCAGCTTGTTGTGATTGCTCATGATGTGGACCCAATCGAATTGGTTGTGTGGCTTCCGGCACTGTGCAGGAAGATGGAAATTCCATACTGCATTGTCAAGGGAAAGGCACGCTTGGGATCGATTGTGCATAAGAAAACTGCCTCTGTTTTGTGCTTGACATCTGTTAAGAATGAAGACAAATTGGAGTTCAGCAGAGTCCTGGAGGCTATTAAGGCTAACTTCAATGACAAGTATGATGAGTACAGAAAGAAGTGGGGTGGTGGTATCATGGGTTCCAAATCCCAGGCCAAGACTAAGGCAAAGGAAAGGCTTCTTGCAAAGGAAGCTGCTCAGAGGATGTCCTAG 1011 0.4926 MEEVEGKIRVEDAPTVEEESLMSTAKEDMASIASPIWITWYQASPSYRDGSRECSNLAKRACTSSPSEAIVSRRVLELAPKRGGKAPVPAAKKKAEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAEKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTSVKNEDKLEFSRVLEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3288 336 Gene3D - 128 311 IPR029064 -
Dod03g3288 336 PRINTS Ribosomal protein L7A/RS6 family signature 251 265 IPR018492 -
Dod03g3288 336 PRINTS Ribosomal protein L7A/RS6 family signature 225 238 IPR018492 -
Dod03g3288 336 PRINTS Ribosomal protein L7A/RS6 family signature 241 251 IPR018492 -
Dod03g3288 336 PRINTS Ribosomal protein L7A/RS6 family signature 206 220 IPR018492 -
Dod03g3288 336 SUPERFAMILY L30e-like 166 307 IPR029064 -
Dod03g3288 336 ProSitePatterns Ribosomal protein L7Ae signature. 244 261 IPR004037 GO:0042254|GO:1990904
Dod03g3288 336 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 193 283 IPR004038 -
Dod03g3288 336 PANTHER - 55 334 - -
Dod03g3288 336 PRINTS Ribosomal protein L7A family signature 124 141 IPR001921 -
Dod03g3288 336 PRINTS Ribosomal protein L7A family signature 168 181 IPR001921 -
Dod03g3288 336 PRINTS Ribosomal protein L7A family signature 144 163 IPR001921 -
Dod03g3288 336 PRINTS Ribosomal protein L7A family signature 202 222 IPR001921 -
Dod03g3288 336 PRINTS Ribosomal protein L7A family signature 107 124 IPR001921 -
Dod03g3288 336 PRINTS Ribosomal protein L7A family signature 295 315 IPR001921 -
Dod03g3288 336 PRINTS Ribosomal protein L7A family signature 263 287 IPR001921 -
Dod03g3288 336 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 55 334 - -
Dod03g3288 336 Coils Coil 179 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3288 Dod-Chr3 65563386 65569032 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3288 78 336 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 84.942 2.61e-166 462