Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3287 ATGAGCTCTCGGTCAGGCAGGGGGGCTGCTATCAGAAGTTATCGGCGGAGGAAGACAGTTTTGGACTTTGACCTTAACCATGAGCCAGGTGGTGAGAATCGGGAGCAGGAAGGACCTTCAACTCAGGTGGGGCCTCAACAACAAGGTCAAGCTGTCCAACCACAGCAGGCTGTGCAGATGCTGCAGGTGGTACAGCCTGCAACAATTGATGTGGAGGCCATTGATGATGATGTTGTTGAATCTAGCCCAAGAGCTTTTGCTGAGGCCAAAAACAATGCAAGAAGAAATCGTGGGAGGACTATAGTTGATGTGGATTTAGAAGATCAGACTATGGTAACCAACAATAATCGCAACAAACGAAGAAGGGAGTCCTCAAGCCAAACAATCATTAATTGTGATTTTTACATTAACTTGGAAGCTGGTAGCAGTTCTACGAAGGAAACCGCTCCAAAGCCACCTGACCCTCCAAAGGAACCCGTCTTCAATTGTCCAATATGTATGGGTCCTTTGACAGAAGAAATGTCAACAAGGTGTGGTCATATCTTTTGTAAGATTTGCATCAAGGGTGCAATAAGTGCTCAGGGTAAATGCCCTACCTGTAGAAAAAAGGTTACTGCGAAAGAGCTTATAAGGGTGTTTCTACCATCAACTAGCTGA 657 0.4581 MSSRSGRGAAIRSYRRRKTVLDFDLNHEPGGENREQEGPSTQVGPQQQGQAVQPQQAVQMLQVVQPATIDVEAIDDDVVESSPRAFAEAKNNARRNRGRTIVDVDLEDQTMVTNNNRNKRRRESSSQTIINCDFYINLEAGSSSTKETAPKPPDPPKEPVFNCPICMGPLTEEMSTRCGHIFCKICIKGAISAQGKCPTCRKKVTAKELIRVFLPSTS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3287 218 MobiDBLite consensus disorder prediction 35 53 - -
Dod03g3287 218 PANTHER RING ZINC FINGER-RELATED 2 218 - -
Dod03g3287 218 MobiDBLite consensus disorder prediction 15 34 - -
Dod03g3287 218 MobiDBLite consensus disorder prediction 1 53 - -
Dod03g3287 218 SMART ring_2 163 200 IPR001841 -
Dod03g3287 218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 217 IPR013083 -
Dod03g3287 218 ProSiteProfiles Zinc finger RING-type profile. 163 201 IPR001841 -
Dod03g3287 218 SUPERFAMILY RING/U-box 162 207 - -
Dod03g3287 218 ProSitePatterns Zinc finger RING-type signature. 178 187 IPR017907 -
Dod03g3287 218 PANTHER ELFLESS, ISOFORM B 2 218 - -
Dod03g3287 218 Pfam Zinc finger, C3HC4 type (RING finger) 162 200 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3287 12 217 C3H Transcription Factor Family AT5G48655 52.885 4.53e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3287 K22651 - gmx:100306616 270.011