Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3285 ATGGTGGTGATCATGCAACAACAACAGCAGCAGCAGCAGCAGAACCCCTCTGTACTGGTGCCACCACCACCGCCGCCGCAACAGCTCAACAACCCTCAGTCCTCTTCCTCCGCCGCCGTCACCGCCACAGCCGCCACCACCCTTAGGTCCCCCTCCTCCTCCGCCGTCCAGCTATCTTCCCCTCCCGTCCCCCCGCCGCCCCGCCAACCCTTACTCTCCTCTTTGCCACTTCTGCCCGACCATGCCGTTGGGCCGGTGGTTCCCGTCGCTGCAGCTCTGCCGTCGGACCCTGCTCTGACGGCTCCGGCGGCGGCGGCGGCAGGAACGTGTCCGCTGGCGAAGGTCCGGCTATCGGACATTGCGCCGTACGATGGAGCACCTGGGGGGCCCTACGTTAGGGCAGTGGAGGCGTTGTCAGGGTCGCTGATGAGGCACAATGCGGCGTTGATCGAATTGGGGAGCGAGGATTCTGCTCTGATGCGGTGTGGATTGGAAGGTGCGAGGTTGTTCTTCAGGAGCAGGGCTCATATGGGTGTTGGCAAGGGTAGCCGTGGGGTTTACATGTACAGGGCAGGAAGGGCTTTGGAAGATTGGGACTCATCTCCCCCTTGTATGGCTGATATTTTTAGATGCATGGGAAAGGTGTCTCGTTCTGCATTGTGTGCCGTTGCTAGGCACTTGCGACTTCGAAGCGACGTTTTTAACCATTTGCTTGATGATGCTCCATTGCCCGCTAATGAGGTGTCTTCATCAGTTCTTGTCGCCACATACTCACATTCTTCGTTGCAAAATGGAAAAGGTGCTATTGGAGGTGGTAAGCCTACTGTGAATGGTGAAGTGGAGAAGGGATTGCTGACATTGATATCTTCAGATACTCCTGGTCTTCAGGTATGTGATCCCAATGGCCGCTGGTATCTTGCAGACAGTGGGTGTGGGCCTGGAGATCTCTTACTGATAACAGGCAAGGCACTTAGCCATGGTACTGCAGGCTTACGTCCTGCTGCTTCTTATAGAGCTTCTCCTGATTACTTTCTAGGTCCCAACAGTGGAGGAAGGACTTCTCTTGCATATAGACTCATGCCACAGGGCAATGCTATACTAGATTGTTCTCCAATTGCAGCAGCTGGCCATGTTATTCCCCAAAGCTATGTTCCAATATCTGTAAGCCAGTTTATGGACGACCTTGCTGCTGAAGAACTGATAGGTAGCAGATGTGATAATGATGATGTTGCTCAAGACAATATGAATAAGGAACCCTCATTAAGAAGTGTTCTATCAGATCCTCTATCTGGCGCATTCCTTGAAGATGCCACGCTTGTCTCATGCGGGCATTCATTTGGTGGTCTTATGCTGAGAAGAGTCCTTGATACATCAAGATGTACTCTCTGCAATGCAGATATTGAGACCAGTTCTTTGACTCCTAATCTTGCTCTTAGAGCTGCAGCTGCTGCTGTTAAGCATGAGGATGATCGAAGGTTATTTCGCAATGCTGCTCTTCGAAAGCGGCGGAAAGAAATGGGTGACCAAATGGATTCAATGAGAAGAGTGAACAGGGAAAATGGTGATTTTACTGCTGTGGATGGGCTACACCGGGGAGTACAATATCCTTTTTCAGTAAATGAGAAAGTTATTATTAAGGGTAACAGAAGAACACCAGAAAAATTTGTTGGGAAAGAAGCTGTCATTACTTCTCAGTGTCTCAATGGCTGGTATTTGCTCAAGATTATTGAAACTGGAGAGAATGTCCGCCTGCAGTACCGTTCTCTTAGGAAGCTCTTGAACTCACCAGCTATAGAGGACCAGTGTCCCACACAGCCAATTCAAAATAGCAGCTCTTAA 1839 0.5084 MVVIMQQQQQQQQQNPSVLVPPPPPPQQLNNPQSSSSAAVTATAATTLRSPSSSAVQLSSPPVPPPPRQPLLSSLPLLPDHAVGPVVPVAAALPSDPALTAPAAAAAGTCPLAKVRLSDIAPYDGAPGGPYVRAVEALSGSLMRHNAALIELGSEDSALMRCGLEGARLFFRSRAHMGVGKGSRGVYMYRAGRALEDWDSSPPCMADIFRCMGKVSRSALCAVARHLRLRSDVFNHLLDDAPLPANEVSSSVLVATYSHSSLQNGKGAIGGGKPTVNGEVEKGLLTLISSDTPGLQVCDPNGRWYLADSGCGPGDLLLITGKALSHGTAGLRPAASYRASPDYFLGPNSGGRTSLAYRLMPQGNAILDCSPIAAAGHVIPQSYVPISVSQFMDDLAAEELIGSRCDNDDVAQDNMNKEPSLRSVLSDPLSGAFLEDATLVSCGHSFGGLMLRRVLDTSRCTLCNADIETSSLTPNLALRAAAAAVKHEDDRRLFRNAALRKRRKEMGDQMDSMRRVNRENGDFTAVDGLHRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIETGENVRLQYRSLRKLLNSPAIEDQCPTQPIQNSSS* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3285 612 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 107 610 - -
Dod03g3285 612 SUPERFAMILY Clavaminate synthase-like 202 392 - -
Dod03g3285 612 MobiDBLite consensus disorder prediction 58 73 - -
Dod03g3285 612 MobiDBLite consensus disorder prediction 1 73 - -
Dod03g3285 612 SUPERFAMILY RING/U-box 421 487 - -
Dod03g3285 612 MobiDBLite consensus disorder prediction 1 16 - -
Dod03g3285 612 MobiDBLite consensus disorder prediction 31 57 - -
Dod03g3285 612 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 419 489 IPR013083 -
Dod03g3285 612 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 107 610 - -
Dod03g3285 612 Gene3D - 184 400 IPR027443 -
Dod03g3285 612 SUPERFAMILY beta-sandwich domain of Sec23/24 6 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3285 Dod-Chr3 65527188 65534201 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3285 421 597 Plant U-box Gene Family AT5G05230 40.113 3.64e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3285 - - adu:107477161 941.028