Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3274 ATGGGAAGGAGATCCTATGCTCTTTCTGTTTCCTCTGTTTTCTCTGTTTACTCTGTTTTTGTGCTCTGTTTTCTCTCCCAAAGAACAACATCAGAGGACGATTCCCAAGCACTTCTGGCACTGAAATCCTCCATAGATTCCTTCAACAAGCTTCCATGGCGAGCAGGGAGCGACGTGTGCACGTGGGCAGGGGTCAAAGACTGCTTCAATGGAAGGGTAAGGAAGCTTGTTCTGGAGCACTCCAACCTCACAGGAACCTTAGAATCAAAGATCCTGAACCGTTTGGATCAACTTCGAGTCCTAAGCTTCAAAGGGAACTCACTCTCAGGTCAAATCCCAGAACTATCCGGCTTAATCAACCTCAAATCTATTTACCTAAACGACAACAACTTCTCCGGCGAGTTCCCATCCTCTGTTTCCGACCTCCACCGCGTCAAAGTCATCGTTTTCTCCGGGAACAAAATCTCCGGCGACGTTCCGGCGTCATTGCTGAAACTCCGGCGACTCTACGTCCTCTACTTGCAGGACAACTCGTTCACCGGAACATTACCGGGGTTCAACCAAACAAGCCTCAGGTTCCTCAACGTCTCGAATAACAAACTTTCCGGCGAGATCCCGGCGACTCCGGCGTTGGTCCGTTTCAATGCGTCGTCTTTCTCAGGGAACCCTTCTCTCTGCGGCGAACAGATCCACGTGCCATGCAAAAATGGCGGGTTTTTGCCTCCTTCAATTAGCCCAAGTTTTCCCCTGATTCCCGGAGGAACAACAACAACGACAACGAAGAAAACATCATCGAACCACACGAAATTGGTCAAGATAATTGGAGGGAGTGTTGGTGGAGTTGTTTTGTTGCTTATATGTTTGGTTCTTTTGTTCTTCACTGTGTCTAGAAACCGTAGGAAGAGAGTTGGGTCGGGAACTAGGAGCAAAAGTGGTGGTGTTGGAAGTGTTGATGAAGGTGAAGATGGTGATGGAGGAGGAGGAGGAGGAGGTGGTGGTGGCGGTGGCGGTGGCAGAGGTGGTAATAATGAAGGGAAACAAGGGGGTTTTGCATGGGAAGGCGAGGGTCTAGGGAAGTTGGTGTTCTGCGGAGCAGGGGATAGGGAGATGAGTTACACATTGGAGGATTTGCTTAAGGCTTCTGCTGAGACAATGGGGAGGGGCATTATGGGAAGTACGTATAAGGCAGTGATGGAGTCAGGGTTCATTGTGACTGTTAAGAGGTTGAAGGATGCTAGGTACCCCGGTTTAGAGGAGTTTAAGGCACAGATTGAAGCGCTTGGGAGGCTAAGGCACCCTAACTTGGTCCCACTCAGGGCTTATTTTCAGGCTAAGGAGGAACGCCTTCTTGTTTATGACTACTTCCCCAATGGCAGTCTCTTCTCTCTCATTCACGGATCAAAAACATCTGGTGGAGGAAAGCCTCTTCATTGGACATCCTGCCTTAAAATCGCCGAAGATCTCGCAACTGGCCTGCTCTATATCCACCAGAACCCTGGCATGACTCATGGAAACCTGAAATCTTCTAATGTCTTGTTGGGTTCCGATTTCGAGTCCTGTCTCACTGACTATGGCCTCACCATGTTCCTAAATCCTGACTCAATGGATGAACCAAGTGCAACTTCTTTATTCTATAGAGCACCGGAGTGTCGAAGCTTTCAAAGGTCAAACACTCAACCAGCCGATGTATACAGCTTCGGCGTCCTTCTCCTCGAGCTCTTGACAGGCAAAACACCCTTCCAAGACCTTGTCCAGGCATATGGTTCAGACATACCAAGGTGGGTTAGGTCGGTCCGCGAGGAAGAGACGGAGTCAGGGGACGATCCTTCCTCAGGCAATGAAGCATCAGAAGAGAAGCTTCAGGCACTTTTGAACATTGCAATGGCATGTGTTTTACTAGTGCCAGAGAACAGGCCTACGATGAGGGAAGTTTTGAAGATGATAAGAGACACAAGAGGGGAAGCTCAAGTCTCATCTAACAGCAGTGATCATTCACCTGGTAGATGGTCAGATACAGTTCAAAGCCTCCCAAGGGAAGAACACCTGAGCATATGA 2055 0.49 MGRRSYALSVSSVFSVYSVFVLCFLSQRTTSEDDSQALLALKSSIDSFNKLPWRAGSDVCTWAGVKDCFNGRVRKLVLEHSNLTGTLESKILNRLDQLRVLSFKGNSLSGQIPELSGLINLKSIYLNDNNFSGEFPSSVSDLHRVKVIVFSGNKISGDVPASLLKLRRLYVLYLQDNSFTGTLPGFNQTSLRFLNVSNNKLSGEIPATPALVRFNASSFSGNPSLCGEQIHVPCKNGGFLPPSISPSFPLIPGGTTTTTTKKTSSNHTKLVKIIGGSVGGVVLLLICLVLLFFTVSRNRRKRVGSGTRSKSGGVGSVDEGEDGDGGGGGGGGGGGGGGRGGNNEGKQGGFAWEGEGLGKLVFCGAGDREMSYTLEDLLKASAETMGRGIMGSTYKAVMESGFIVTVKRLKDARYPGLEEFKAQIEALGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLTMFLNPDSMDEPSATSLFYRAPECRSFQRSNTQPADVYSFGVLLLELLTGKTPFQDLVQAYGSDIPRWVRSVREEETESGDDPSSGNEASEEKLQALLNIAMACVLLVPENRPTMREVLKMIRDTRGEAQVSSNSSDHSPGRWSDTVQSLPREEHLSI* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3274 684 MobiDBLite consensus disorder prediction 302 348 - -
Dod03g3274 684 Pfam Leucine rich repeat 120 178 IPR001611 GO:0005515
Dod03g3274 684 Gene3D Transferase(Phosphotransferase) domain 1 455 671 - -
Dod03g3274 684 SUPERFAMILY L domain-like 30 227 - -
Dod03g3274 684 Pfam Protein kinase domain 382 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3274 684 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 9 674 - -
Dod03g3274 684 MobiDBLite consensus disorder prediction 653 684 - -
Dod03g3274 684 Gene3D Ribonuclease Inhibitor 31 187 IPR032675 -
Dod03g3274 684 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 674 - -
Dod03g3274 684 MobiDBLite consensus disorder prediction 652 684 - -
Dod03g3274 684 SUPERFAMILY Protein kinase-like (PK-like) 383 656 IPR011009 -
Dod03g3274 684 Gene3D Phosphorylase Kinase; domain 1 364 454 - -
Dod03g3274 684 ProSiteProfiles Protein kinase domain profile. 379 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3274 684 Gene3D Ribonuclease Inhibitor 188 237 IPR032675 -
Dod03g3274 684 Pfam Leucine rich repeat N-terminal domain 32 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3274 Dod-Chr3 65462411 65469047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3274 11 684 Receptor kinase-like Gene Family AT1G60630 60.997 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod03g3274 Pkinase 1.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3274 - - gmx:100820186 981.859