Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3271 ATGGCGGCTACCGTATCTGCGTGGTCGAAGCCCGGAGCGTGGGCTTTGGATTCGGAAGAACACGAAGCTGAGCTCCTCCAACAACAAAACAGCAGCAACAACGATGGCAATGACCAAAATGCCCTTACCGGAAAACCACTCACCGACTTCCCCTCCCTTGCCGTCGCCGCCGCCACAAAGCCCAAGAAGAAGAAAGGCCAGACCCTCTCTCTTGCTGAGTTTACCGCCGCCAAAACCGCCCCATCCGATCCCATCGTGCTCCCCACCGGCCCTCGCCAGCGCACCGCCGAGGAGCTCGACCGGGACCGCAACCGCCTCGGCGGCGGGTTCAGGTCCTATGGCCTCGATCGCCAGAACAGAAACTCCGGCGACGTTGGCGGCGACGAGTCTTCCAATTCGAGGTGGGGCTCGTCTAGGGTTTCGGACGAAACGAGGCGAAACGGCGCGTTTAGGGATTCGAATCGCGAATTGGCTCCGTCGCGTGCCGACGAGATCGATAATTGGGCCGCCGCGAAGAAATCCACTGTCGGTAACGGTTTCGAGAGGAGGGAAAGGGAAAGGAGCGGTTTTTTCGATTCTCAATCGCGTGCTGATGAATCTGAGAGTTGGGTTTCGAACAAGAGCTTTGTGGCTTCGGAGGGTCGGAGATTCGGTTCCGGTGGTGGTGAAAGGGAGAGGAGGGTAGTAGGGTTTGCGTCTAGCGGTGGTGCTGATTCTGATAATTGGAACAAGAAAAAAGGTGAATTCAATGGTGGGGGTGAGATAAGTGAGAGTGGTAGTGGTGGAAGGCCTAGGATTGTGCTGCAACCTCGTACTGTGTCGGTGAATAATGAAGGCCAGGATGGGGGTAATGGTGTTGGTGGTGGTGCTGGGAATGTGGTGAAGCCTAAGGGTCCTAGTCCGTTTGGCGAGGCAAGGCCGAGGGAGGAGGTGTTGAAGGAGAAGGGACAGGATTGGAAGAAGATTGATGAGCAGCTTGAGAGCGTGAAGATTAAGGAGGCTGCTGAGAAGAAGGAAGGTTTTGGGAAGAGGGGTTTTGGTTCTGGCAACGGGCGTGCTAGCTTGCCTGAACATAGGACTGAGAGGAGTTGGAGGAAGGCTGAAGAATCAGAGAGCAAGGCTGAAGCTGAATCTGATGATGGTCGTCCAGAAAGTGCTGATAAGGTGGAGGAAGAACACGTTGAAGAAAATTGA 1194 0.5536 MAATVSAWSKPGAWALDSEEHEAELLQQQNSSNNDGNDQNALTGKPLTDFPSLAVAAATKPKKKKGQTLSLAEFTAAKTAPSDPIVLPTGPRQRTAEELDRDRNRLGGGFRSYGLDRQNRNSGDVGGDESSNSRWGSSRVSDETRRNGAFRDSNRELAPSRADEIDNWAAAKKSTVGNGFERRERERSGFFDSQSRADESESWVSNKSFVASEGRRFGSGGGERERRVVGFASSGGADSDNWNKKKGEFNGGGEISESGSGGRPRIVLQPRTVSVNNEGQDGGNGVGGGAGNVVKPKGPSPFGEARPREEVLKEKGQDWKKIDEQLESVKIKEAAEKKEGFGKRGFGSGNGRASLPEHRTERSWRKAEESESKAEAESDDGRPESADKVEEEHVEEN* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3271 397 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 372 - -
Dod03g3271 397 MobiDBLite consensus disorder prediction 302 343 - -
Dod03g3271 397 MobiDBLite consensus disorder prediction 139 168 - -
Dod03g3271 397 MobiDBLite consensus disorder prediction 115 138 - -
Dod03g3271 397 MobiDBLite consensus disorder prediction 22 50 - -
Dod03g3271 397 MobiDBLite consensus disorder prediction 355 397 - -
Dod03g3271 397 MobiDBLite consensus disorder prediction 231 397 - -
Dod03g3271 397 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 372 IPR010433 GO:0003743
Dod03g3271 397 MobiDBLite consensus disorder prediction 177 194 - -
Dod03g3271 397 Pfam Plant specific eukaryotic initiation factor 4B 7 330 IPR010433 GO:0003743
Dod03g3271 397 MobiDBLite consensus disorder prediction 25 46 - -
Dod03g3271 397 MobiDBLite consensus disorder prediction 74 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3271 Dod-Chr3 65410403 65412950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3271 1 397 Eukaryotic Initiation Factors Gene Family AT4G38710 48.055 1.88e-65 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3271 - - pvu:PHAVU_011G033300g 404.445