Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3256 ATGCGCAGAGCGATCTCTTTCCTCGTTCAGCCGCGGTTCCTCCTTCTCCTCCTCGTTCTCTCAATTTTCATCGTTTTCGCATTCTATGGCTCTGAACAGGCTGAGGAGGAAGTAGAAGAGGAGCCTGAAATTACGCACAGAGTATTCTTGGATGTTGATGTTGATAAACAACGTTTAGGTAGGATCGTGATTGGATTGTATGGCCATGTTGTACCAAAAACTGTTAAAAATTTTAGGGCTTTGTGCACAGGGAAGAATGGCAAGAGTGCCAGTGGCTTAAAACTTCATTACAAAGGAACACCATTTCATCGGATAATATCTGGTTTTGTGGTTCAGGGTGGAGACATCACTCATCATGATGGCAAAGGATCTGAATCTATTTATGGTGGCACCTTTCGTGACGAGAATTTCAAAATAAAACACTCTCATGCTGGTGTTGTCTCTATGGCAAATTCAGGACCTGATTCCAATGGCTCCCAGTTTTTTATTACCACAGTGAAGGCCAGCTGGTTGGATGGAGACCATGTTGTCTTTGGCAAGGTTCTTCAAGGCATGGATCTTGTGTTTGCAATTGAAGGGGGAGCCGGAACCTATAGTGGAAAACCCAGAAAGGAGGTAGTGATTGCAGACTCTGGAGAGATACCCAAGAGCCGGTGGGACGAGGAAAGTTCAACTTCCAAGTTTCAGTGA 690 0.4478 MRRAISFLVQPRFLLLLLVLSIFIVFAFYGSEQAEEEVEEEPEITHRVFLDVDVDKQRLGRIVIGLYGHVVPKTVKNFRALCTGKNGKSASGLKLHYKGTPFHRIISGFVVQGGDITHHDGKGSESIYGGTFRDENFKIKHSHAGVVSMANSGPDSNGSQFFITTVKASWLDGDHVVFGKVLQGMDLVFAIEGGAGTYSGKPRKEVVIADSGEIPKSRWDEESSTSKFQ* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3256 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 23 223 - -
Dod03g3256 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 23 223 - -
Dod03g3256 229 Gene3D - 34 220 IPR029000 -
Dod03g3256 229 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 53 211 IPR002130 GO:0000413|GO:0003755
Dod03g3256 229 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 97 114 IPR020892 GO:0003755|GO:0006457
Dod03g3256 229 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 49 213 IPR002130 GO:0000413|GO:0003755
Dod03g3256 229 MobiDBLite consensus disorder prediction 209 229 - -
Dod03g3256 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 172 IPR002130 GO:0000413|GO:0003755
Dod03g3256 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 188 IPR002130 GO:0000413|GO:0003755
Dod03g3256 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 114 IPR002130 GO:0000413|GO:0003755
Dod03g3256 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 145 160 IPR002130 GO:0000413|GO:0003755
Dod03g3256 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 81 IPR002130 GO:0000413|GO:0003755
Dod03g3256 229 SUPERFAMILY Cyclophilin-like 44 214 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3256 Dod-Chr3 65251667 65256430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3256 60 211 U-box Gene Family AT5G67530 41.830 9.46e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3256 - - gmx:100800775 375.17