Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3242 ATGACAGTTGAGAGGAGGTTTGTTTTGGTGGGGATTAGAATAGATAGCCATAGCAGACAGCTCATTAACTGGGCTCTTGTCAAAGTTGCTGAACCTGGAGATTGTGTTATTGCACTCCATGTAGTTAAAAGTCCAGATCATGTTTCCAAAAAGAAGACCTTGATAGATGGCTATTTAGAGGTTTATGAAGGCCTGTGTGATGTGAAGAAGGTAGGTCTCACTGGTCAAATCTTGACAGGAAGCTCCATCCGAGACATTCTTGTTAGAGAAGCAAAGACCCATGGAGCTTTGGCTCTGGTGGTAGGGGGCGGAGCTGTCACAGCCAAATATTGTGCCAAACGACTTCCACCCACCACCAATGTTCTAGCCATCCAAGATTCAAGAATTGTCTACAGGAGGTGCACCAATAAACAACTACCAGGTGGTTTGATAGTGGATCCAAGACCAAGTTTAAGCATAGAAAGCATCAATGATAGAGTAACCCAGTCTGAATTTGGTGACTCAGAGCTGGAGGTTAACAAGCCAAGACATCAAAGTACCAGGGAATTGAAGGAAGAATCATTTAGCAGATCAGAAAGGTTCAAGTCAAGGTCAATATCTATGTTTGCAGGTGACCCTTCTCAGCAGAAGCTTGGGTGGCCTCTGCTTCTCAGAGCCAATTCAGAAATCTCACAAAACATTCATGCAAGGGACGTCTCAGTTGTGCAATGGGTAATGAGCTTGCCGGATCGTTCACCACAAGAAAGTCCTCACTCTTCTTCCATTGAGGAGGAAAACGTGTCTGAAAGGGGCATCAGTGATGTTGAGGATGAGAGCTCTAAAAATGGTTCACCTTCATCTGTTGAACTACCAAAGGGCCTAAAGGGGATGTTTAACATCAATACAATCAATTGCAAGTGGTTCAACCTTGAGGTTCTGAAGTCTTGCACTAGCCAATTCTCTTCAGAAAACTTGATTGGGAAAGGAGGGTGCAACCGTGTGTACAAAGGATCTCTCCCTGATGGAAAGCCAATTGCAGTTAAAGTTTTGCAGTCATCAAAAGAAGCATGGAAAGATTTTGCCCTTGAGGTGGAAATAATATCCTCATTGATGCACAAAAACATCACCCCTCTACTTGGAATTTGTATTGAGGACCGTGCTTTGATTTCTGTTTACGATTATTTCCCCAAAGGCAGCTTAGAGGAAAGTTTACATGGCAAGGACAAGGATGGATCCATCTTGTCATGGGAAGCGAGATTTAAAATAGCTGTTGGGATTGCTGAAGCCTTGGATTACCTACACAGGGAAACTTTGAAGCCTGTTATACATAGAGATGTCAAGTCTTCAAACATTCTTCTTTCCCATGGTTTTGAACCACAATTATCTGATTTCGGACTTGCAATATGGGGACCAACAACTACATCCTTTCTGACACAAGAAGATGTTGTAGGAACATTTGGTTATCTAGCTCCTGAATACTTCATGTATGGTAAGGTCAGTGACAAGATAGATGTGTATGCCTTTGGAGTAGTGCTGCTTGAATTAATATCAGGAAGGGAACCAATCAACCCGGAACCTTGCAAAGGACAGGAGAGCTTGGTTGTGTGGGCAAAACCAATAATAGAGAGTGGGGATATTAAAAGCTTATTGGACCCAAAATTAGAAGGGAAGTTTCATGAGGCCCAATTGAAAAGAATGGTTCTGGCAGCATCTTTATCCATTACACGGGCTGCCCGGCTTCGTCCTAAAATGAACCAGATACTGAAGATACTAAAAGGAGATGAGCAAGTTGGAAGTGTCTTAAACTCCCAAGGAGATGATAATGACCACTCAGAAAACCAAGAAAACATCGATGATGAAGTCTATCCAAGTTCAAGTGCAGAGTTACACCTCAGTCTTGCATTACTTGGTGTTGAAGATGACACTACATTATCATTTAGTAGCACAGACCACAGCTACATTAGTGAACACTCAAAAGAACAATGGAGCAGGTCATCAAGTTTTGATTAG 1989 0.4248 MTVERRFVLVGIRIDSHSRQLINWALVKVAEPGDCVIALHVVKSPDHVSKKKTLIDGYLEVYEGLCDVKKVGLTGQILTGSSIRDILVREAKTHGALALVVGGGAVTAKYCAKRLPPTTNVLAIQDSRIVYRRCTNKQLPGGLIVDPRPSLSIESINDRVTQSEFGDSELEVNKPRHQSTRELKEESFSRSERFKSRSISMFAGDPSQQKLGWPLLLRANSEISQNIHARDVSVVQWVMSLPDRSPQESPHSSSIEEENVSERGISDVEDESSKNGSPSSVELPKGLKGMFNINTINCKWFNLEVLKSCTSQFSSENLIGKGGCNRVYKGSLPDGKPIAVKVLQSSKEAWKDFALEVEIISSLMHKNITPLLGICIEDRALISVYDYFPKGSLEESLHGKDKDGSILSWEARFKIAVGIAEALDYLHRETLKPVIHRDVKSSNILLSHGFEPQLSDFGLAIWGPTTTSFLTQEDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPINPEPCKGQESLVVWAKPIIESGDIKSLLDPKLEGKFHEAQLKRMVLAASLSITRAARLRPKMNQILKILKGDEQVGSVLNSQGDDNDHSENQENIDDEVYPSSSAELHLSLALLGVEDDTTLSFSSTDHSYISEHSKEQWSRSSSFD* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3242 662 Gene3D Transferase(Phosphotransferase) domain 1 388 599 - -
Dod03g3242 662 MobiDBLite consensus disorder prediction 255 270 - -
Dod03g3242 662 ProSiteProfiles Protein kinase domain profile. 313 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3242 662 Gene3D Phosphorylase Kinase; domain 1 285 387 - -
Dod03g3242 662 Pfam Protein kinase domain 314 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3242 662 SMART serkin_6 313 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g3242 662 SUPERFAMILY Protein kinase-like (PK-like) 294 584 IPR011009 -
Dod03g3242 662 MobiDBLite consensus disorder prediction 242 281 - -
Dod03g3242 662 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 3 640 - -
Dod03g3242 662 CDD USP_Like 8 102 - -
Dod03g3242 662 PANTHER OS08G0249100 PROTEIN 3 640 - -
Dod03g3242 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3242 Dod-Chr3 65097144 65102018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3242 301 661 Trihelix Transcription Factor Family AT1G70460 38.859 4.60e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod03g3242 Pkinase 1.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3242 - - lang:109355495 989.564