Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3231 ATGTCGCTGTCGACCGGAAACAGCAGCAAGATCCGGCGAATTGTTCGGATCCGGCAGATGCTCATGCGGTGGCGGAGGAAGGCGCGCATCGCCGCGGGCCGTACGGCGGCGTCGGACGTGCCGTCGGGACATGTGGCGGTGTGTGTGGGGCCGAGCATGAGGAGGTTCATCGTGCGCGCGACGCAGCTGAACCACCCAATATTCCGGAAGCTTCTATTGGAAGCTGAAGAAGAGTACGGTTTCTGCAACCGTGGGCCTCTCGTTTTCCCTTGCGACGAGTCTCTCTTCGAGAAGCTTCTTCGGGTCATGGCCCGACCCGAATCAGTGTTCGTTACGCTCGAAGAGTTCCAGAGAAGGTGCCACGTAGACATCAGAAAAAGTAGTAGTGGTGTTAGTGGTGGTTTTGAGTTTGCAGGAGAATCGTGGCCGTTGCTTCATGACGAGTTAATCTGCTGA 456 0.5702 MSLSTGNSSKIRRIVRIRQMLMRWRRKARIAAGRTAASDVPSGHVAVCVGPSMRRFIVRATQLNHPIFRKLLLEAEEEYGFCNRGPLVFPCDESLFEKLLRVMARPESVFVTLEEFQRRCHVDIRKSSSGVSGGFEFAGESWPLLHDELIC* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3231 151 Pfam Auxin responsive protein 16 102 IPR003676 GO:0009733
Dod03g3231 151 PANTHER SMALL AUXIN-UP RNA-RELATED 6 146 - -
Dod03g3231 151 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 146 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3231 Dod-Chr3 64910112 64910567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3231 6 128 Calmodulin-binding Proteins AT4G34750 51.880 2.72e-42 136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3231 03 64910112 64910567 Dod03g3231 03 64910112 64910567 ECH